Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 >seq2 Length=1153633 Score = 113 bits (124), Expect = 4e-20 Identities = 300/457 (66%), Gaps = 6/457 (1%) Strand=Plus/Minus Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430 |||||| || |||| || ||||| ||||| || || || | || || || | || Sbjct 770845 TTGATAATCTGACACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTC 770786 Query 13431 CATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAA 13490 |||||| || || ||||| ||||| | | || || || || | | || | Sbjct 770785 CATAAAGTCAAAGGGATTGGTTGAATGATAATGCTTGTCTACGCCAAGAGCCACCAAAAG 770726 Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550 | ||| || | ||| ||||| || ||| |||| | | ||||||||| || | Sbjct 770725 ACGATCCGCCACAAATTCAATGTACTGACACATGAGCTTGGCATTCATACCAATCAAAGA 770666 Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610 ||||| | || ||||| ||||||| || ||| ||||| || ||||| || Sbjct 770665 AACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTCA---ATAATGAT 770609 Query 13611 CTTA---ATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667 | | ||| | || ||| || ||| ||||| ||| | | ||| ||||| Sbjct 770608 ATCACGGATACGTTGATGAGATGGCTGATGACGAAGATGAGAAAACAAGAGACATGCAAA 770549 Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727 ||| ||| | || ||||| | |||||| ||||| ||||| | |||||||| Sbjct 770548 ATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAGACCTGGCAT 770489 Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787 |||||| || ||||| | |||||| || | ||| || || || |||||||| || || || Sbjct 770488 CAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAAGATGCCTTC 770429 Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 |||||||| || || | ||| ||||| |||| ||| Sbjct 770428 CACTGCAGCGAATGCAACTAGACGTTCAGCAAAAGAT 770392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588357305360