Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 >seq9 Length=614693 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||||||| | ||| ||||||||| | |||||||||||| | |||||| | || || Sbjct 95429 CACCAAATGTAAAGTCGACTCCTTTTGAATATTGTAATCGGAAAGTGTACGACCATCTTC 95370 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 | ||||||||| || ||||| | || || || || | || | ||||| || || Sbjct 95369 AAGTTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTG 95310 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 |||| | ||||| | ||| | || | || || || | || || || || Sbjct 95309 GATCTTTTGCTTGACGTTTTCAATAGAATCAGATGATTCTACTTCCAATGTGATGGTCTT 95250 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 ||| || ||||| || ||||| ||||||||| Sbjct 95249 TCCAGTGAGAGTCTTGACAAAGATTTGCATT 95219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369256052292