Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq67 96.9 4e-15 >seq67 Length=1302434 Score = 96.9 bits (106), Expect = 4e-15 Identities = 257/383 (67%), Gaps = 16/383 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || ||||| || | || | ||||| |||||| ||||| | ||| |||||||| Sbjct 436447 AAGTTTGAGGATCTTGGTATTGGTGGTCTAGATAAGGAATTCAGTGATATCTTCAGACGT 436388 Query 164458 GCATTTGCTTCTAG-ATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTA-AACATA 164515 |||||||||||| | ||| |||| || | |||| || || |||| ||||| Sbjct 436387 GCATTTGCTTCTCGTATC-TTTCCACCTTCCATTGTCGAAAAGTT-GGGTGTACAACATG 436330 Query 164516 TAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCA 164575 | ||||| |||| ||| |||| ||||| || || || || || || |||||| | Sbjct 436329 TCAAAGGTCTTTTGTTATATGGTCCTCCAGGCACTGGCAAGACTTTGATTGCTCGACAAA 436270 Query 164576 TTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 ||| ||| | |||||| | || || || | |||| |||||||||| | |||| Sbjct 436269 TTG-GCAAAATGTTAAATGCACAGGAACC--AAAGGTCGTTAGTGGTCCTGAAGTCTTGA 436213 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||| | ||| || | |||| |||||| | ||| ||||| || ||||||| || Sbjct 436212 GCAAGTTTGTTGGCCAAAGTGAAGAGAATGTTCGTAAGCTGTTTGCCGATGCTGAAGCAG 436153 Query 164693 AACAAAAG---AAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAG 164749 | | ||| |||| || | | || || ||| | ||| | |||||||| | | Sbjct 436152 AGTACAAGTCAAAAGGAGAGGAATCAAG---CTTGCATATCATTATCTTTGATGAATTGG 436096 Query 164750 ATGCTCTTTGCAAAAAACGTGGT 164772 |||| |||||||| |||||||| Sbjct 436095 ATGCCATTTGCAAACAACGTGGT 436073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871448818400