Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451
15.1_202014-08-05] 74 sequences; 30,708,998 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq9 116 4e-21
seq1 100 3e-16
>seq9
Length=614693
Score = 116 bits (128), Expect = 4e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823
||| ||||||| | ||||| || || | |||||||| | ||||| | ||| ||||||
Sbjct 95215 ACACAATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACATTGGAAGTAGAAT 95274
Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883
|| || | || || | ||||| |||||||| ||||| ||||| || ||||| |
Sbjct 95275 CATCTGATTCTATTGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCGG 95334
Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943
| || ||| | ||||||| || ||||||||||| ||||||| | | | | ||| |
Sbjct 95335 ACCAGCAACGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGTCGTACACTTTCCGATT 95394
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
| || |||||||| || || ||| | ||| |||| ||
Sbjct 95395 ACAATATTCAAAAGGAGTCGACTTTACATTTGGTGCT 95431
>seq1
Length=3088551
Score = 100 bits (110), Expect = 3e-16
Identities = 154/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| |||||| | || || || || | ||||| || | |||||| | || | || ||
Sbjct 605561 CAACATGCAAATCTTCGTCAAGACCCTTACTGGCAAGACTATCACCTTGGAGGTGGAGTC 605620
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| || |||| || | ||||| | |||||| ||||| ||||| || || || ||
Sbjct 605621 ATCTGATTCCATTGAAAACGTCAAGAACAAGATTCAAGACAAGGAAGGCATTCCCCCAGA 605680
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGAC 26942
||| ||| | ||||| | | ||||||||||| ||||||| | | | |||| |||
Sbjct 605681 TCAGCAACGTCTCATCTTTGCAGGCAAACAACTTGAAGATGGTCGTACTTTGTCA--GAC 605738
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||||||||| || |||||| | || |||||||
Sbjct 605739 TACAACATTCAAAAGGAGTCTACTCTTCACTTGGTCCT 605776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661957237280
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |