Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 >seq2 Length=1153633 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 ||||| || ||||| || || |||||||||| |||||||| | | |||||| || || Sbjct 770832 ACTCGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAAATCATGTCCATAAAGTCAAAG 770773 Query 104662 GGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACA 104721 ||||| | | | ||| || || |||||| | | ||| || |||||||||||| Sbjct 770772 GGATTGGTTGAATGATAATGCTTGTCTACGCCAAGAGCCACCAAAAGACGATCCGCCACA 770713 Query 104722 AATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780 ||||| ||||||| ||||| || || |||||||| || | || | || |||||||| Sbjct 770712 AATTCAATGTACTGACACATGAGCTTG-GCATTCATACCAATCAAAGAAACAGGTAAAGC 770654 Query 104781 GTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 | || || || |||| |||||| | || ||||| Sbjct 770653 ATCTGTTAAGAATTCTTGCTCGATATTAACAGCTTC 770618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935612251470