Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq13 253 4e-62 seq1 250 5e-61 seq34 176 9e-39 seq45 100 6e-16 >seq13 Length=483973 Score = 253 bits (280), Expect = 4e-62 Identities = 704/1061 (66%), Gaps = 59/1061 (6%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||| ||||| || ||||||| ||||| || || ||||||| |||||| |||| ||| Sbjct 33525 GGTGAAGATCTTTGCAACTGTGAATTCTCTCTTGCTTATGGTGCCAAGATTTTGCTCAAC 33466 Query 279405 TCTACC-CGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 ||| | | || | |||||||||| || |||||| | |||| |||||| Sbjct 33465 CGTACTTCTCTTCGTC-TCAAGCGTGGTCGTCGTTATGGTTTGTGTGGTCACAATGGCTG 33407 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 ||||| |||||| ||||| |||||||| || | || | ||||| || ||| | Sbjct 33406 TGGTAAATCCACTCTTATGCGTGCCATTGCCAATGAGCAAGTTGAAGGCTTCCCTCCCAA 33347 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583 |||||| | | ||| || ||||| || ||||| || || ||| | |||| | Sbjct 33346 GTCTGAGCTTAAGACTGTCTATGTCGAACACGATATTGATGGTTCTGAAGCTGATACTCC 33287 Query 279584 TGTGTTCGACTTCCTAA---CGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGA 279640 | || | || ||| | | | ||||| |||| || || || | |||| Sbjct 33286 TTTGGTTGATTTCATCATTGCTTCTGA-----AGGTGTTGAAACCAAGGACA----AGGA 33236 Query 279641 AATCATC-CAGAAA-CTGGAG-GCCAATGGTTTTGATGAAAGAATGCGTAA--TCTGCCA 279695 || | | ||| || | | | |||| || |||| |||| || | ||| || Sbjct 33235 AAAGGTTGCTCAAATCTTGCGTGATTATGGCTTCTCTGAAGAAATG-GTCACTTCTCACA 33177 Query 279696 GTA--GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTAC 279753 | || ||| |||| ||||| |||||||||||||| || || |||| ||||| | Sbjct 33176 CCATTGGCTCTTTGTCTGGTGGCTGGAAGATGAAGCTTGCTCTTGCTCGTGCCATGTTGA 33117 Query 279754 TGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAG 279813 || ||| || || | || | || || || || ||||| ||||| ||| || | Sbjct 33116 TGAATGCTGACATCTTGCTTTTGGACGAACCTACTAACCATTTGGACGTTGTCAATGTTG 33057 Query 279814 CCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACG 279873 | ||| | | | |||||| || |||||| ||| ||||| ||||||| ||||||| Sbjct 33056 CTTGGTTGGAGAACTACCTTCTTGGTTTGAAGACTGTCACTTCCATCATTGTTTCTCACG 32997 Query 279874 ACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGC 279933 ||||||| ||| | ||| ||||||||||| |||||||||||| ||| | || |||| Sbjct 32996 ACTCTGGTTTCTTGGATCACGTGTGCTCTGACATCATTCACTACGAGAAGAACTACAAGC 32937 Query 279934 TCTCCAAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCG 279990 || |||| | | || ||||| |||| ||||| ||| |||| || || | Sbjct 32936 TC---AAGCGTTATAAGGGTAACCTTTCTGAATTCGTCAAGAAGGTCCCTACTGCTGCTG 32880 Query 279991 CCTACTATGACCTGAAGGACGCCACC---GCCAAGTGGGAATTCCCTGAGCCAGGGTTTC 280047 ||||||| || | | |||| | ||| | | |||||||| || || | | Sbjct 32879 CCTACTACTCTTTGGAAGCTGCCAACATTGCC---TTCAAGTTCCCTGAACCTGGTTATT 32823 Query 280048 TGGAGGGCATCACATCAAAGGATCGCGCAATC------ATGAAGCTCCGTGGCGTC---- 280097 |||| || |||| | ||||| || || || |||||| | || | || Sbjct 32822 TGGAAGGTATCAAGACCAAGGAACGTGCCATTCTCAAGATGAAGAACGTTGACTTCCAAT 32763 Query 280098 -TCCTT-TGCTTATCCCAATGGCCCCAACATCTTCAGCAGTGTCAA--CTCGCAGGTTTC 280153 |||| | || || || | ||| | | |||||| || ||| ||| | |||| Sbjct 32762 ATCCTGGTACTGCTCGTAAGCAGCTCAAGAACATCAGCA-TG-CAATGCTCTC---TTTC 32708 Query 280154 TATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAA 280213 | || || ||| ||||||||| || |||||||| || |||||||| | ||||| Sbjct 32707 T------TCTCGTGTTGCTGTCATTGGTCCTAATGGTGCTGGCAAGTCTACTTTGATCAA 32654 Query 280214 AGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCG 280273 || ||||||| || | | || | || |||| ||||||||||||||| |||| Sbjct 32653 GCTCTTGACTGGTGAAATGGAAGCTGATACTGGTACCGTCTGGAAGCATCCCAACTTGCG 32594 Query 280274 GATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCC 280333 || ||||| || || || ||||||||||||||||| || || ||| ||||| ||||| Sbjct 32593 TATTGCTTATGTTGCCCAACACGCTTTCCACCACATTGAAAAGCACTTGGACTCTACTCC 32534 Query 280334 TAACCAATACATTCAGTGGCGCTATGCAAGTGGGCAGGATC 280374 |||| | |||||||| ||||| ||||| | ||| | |||| Sbjct 32533 TAACGAGTACATTCAATGGCGTTATGCTACTGGTGAAGATC 32493 Score = 113 bits (124), Expect = 9e-20 Identities = 175/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 280638 CCTCTGACTGCCAAGAATGTTGAGGACCATATGACCAAGCTGGGTCTGGACCCCGAGTTT 280697 ||| ||||| ||||| | ||||| | || ||| | | ||| |||| || || ||| Sbjct 32220 CCTTTGACTTCCAAGGAGATTGAGAAGCACTTGAATGAAGTTGGTTTGGAACCTGAATTT 32161 Query 280698 ACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGA 280757 | ||||||||||| || || ||||||||||| || || |||||||| | || || || Sbjct 32160 GCCACTCACTCTCGTATCCGTGGTCTTTCTGGTGGACAAAAGGTCAAGTTGGTTATTGGT 32101 Query 280758 GCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGAC 280817 || || ||||| | | |||||| || | ||||| ||||| |||||||| || |||| Sbjct 32100 GCTGCCATGTGGAATCGTCCTCACATGTTGGTTCTTGACGAACCTACCAATTACTTGGAT 32041 Query 280818 CGCGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTC 280877 || || || || ||| || || |||| | | || ||| || || ||||| | Sbjct 32040 CGTGACTCTCTTGGTGCTTTGGCTGGTGCTATCAAGGAATATGGTGGTGGTGTCGTCATT 31981 Query 280878 ATTTCTCACA 280887 || |||||| Sbjct 31980 GTTACTCACA 31971 >seq1 Length=3088551 Score = 250 bits (276), Expect = 5e-61 Identities = 696/1051 (66%), Gaps = 39/1051 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||| ||||| || ||||||| ||||| || || ||||||| |||||| |||| ||| Sbjct 1455195 GGTGAAGATCTTTGCAACTGTGAATTCTCTCTTGCTTATGGTGCCAAGATTTTGCTCAAC 1455136 Query 279405 TCTACC-CGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 ||| | | || | |||||||||| || |||||| | |||| |||||| Sbjct 1455135 CGTACTTCTCTTCGTC-TCAAGCGTGGTCGTCGTTATGGTTTGTGTGGTCACAATGGCTG 1455077 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 ||||| |||||| ||||| |||||||| || | || | ||||| || ||| | Sbjct 1455076 TGGTAAATCCACTCTTATGCGTGCCATTGCCAATGAGCAAGTTGAAGGCTTCCCTCCCAA 1455017 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583 |||||| | | ||| || ||||| || |||||||| || ||| | |||| | Sbjct 1455016 GTCTGAGCTTAAGACTGTCTATGTTGAACACGACATTGATGGTTCTGAAGCTGATACTCC 1454957 Query 279584 TGTGTTCGACTTCCTAA---CGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGA 279640 | || | || ||| | | | ||||| |||| || || || | |||| Sbjct 1454956 TTTGGTTGATTTCATCATTGCTTCTGA-----AGGTGTTGAAACCAAGGACA----AGGA 1454906 Query 279641 AATCATC-CAGAAA-CTGGAG-GCCAATGGTTTTGATGAAAGAATGCGTAA--TCTGCCA 279695 || | | ||| || | | | ||||||| |||| |||| || | ||| || Sbjct 1454905 AAAGGTTGCTCAAATCTTGCGTGATTATGGTTTCTCTGAAGAAATG-GTCACTTCTCACA 1454847 Query 279696 GTA--GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTAC 279753 | |||||| |||| ||||| |||||||||||||| || || |||| ||||| | Sbjct 1454846 CCATTGGTTCTTTGTCTGGTGGCTGGAAGATGAAGCTTGCTCTTGCTCGTGCCATGTTGA 1454787 Query 279754 TGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAG 279813 || ||| || || | || | || || || || ||||| ||||| ||| || | Sbjct 1454786 TGAATGCTGACATCTTGCTTTTGGACGAACCTACTAACCATTTGGACGTTGTCAATGTTG 1454727 Query 279814 CCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACG 279873 | ||| | | | |||||| || |||||| ||| ||||| ||||||| ||||||| Sbjct 1454726 CTTGGTTGGAGAACTACCTTCTTGGTTTGAAGACTGTCACTTCCATCATTGTTTCTCACG 1454667 Query 279874 ACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGC 279933 ||||||| ||| | ||| ||||||||||| ||||||||||| ||| | || |||| Sbjct 1454666 ACTCTGGTTTCTTGGATCACGTGTGCTCTGATATCATTCACTACGAGAAGAACTACAAGC 1454607 Query 279934 TCTCCAAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCG 279990 || |||| | | || ||||| |||| ||||| ||| |||| || || | Sbjct 1454606 TC---AAGCGTTATAAGGGTAACCTTTCTGAATTCGTCAAGAAGGTCCCTACTGCTGCTG 1454550 Query 279991 CCTACTATGACCTGAAGGACGCCACC---GCCAAGTGGGAATTCCCTGAGCCAGGGTTTC 280047 ||||||| || | | |||| | ||| | | |||||||| || || | | Sbjct 1454549 CCTACTACTCTTTGGAAGCTGCCAACATTGCC---TTCAAGTTCCCTGAACCTGGTTATT 1454493 Query 280048 TGGAGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTT 280107 |||| || |||| | ||||| || || || | ||| | ||| ||| | Sbjct 1454492 TGGAAGGTATCAAGACCAAGGAACGTGCCATTCTCAAGATGAAGAACGTTGACTTCCAAT 1454433 Query 280108 ATCCC---AATGGCCCCAA-CATCTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCA 280163 |||| | || | || || || || | ||| | ||| |||| | || Sbjct 1454432 ATCCTGGTACTGCTCGTAAGCAGCTCAAGAACA-TCAGCATGCAATGTTCTCTTTCTTCT 1454374 Query 280164 CGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACT 280223 || ||| ||||||||| || |||||||| || |||||||| | ||||| | ||||| Sbjct 1454373 CGTGTTGCTGTCATTGGTCCTAATGGTGCTGGCAAGTCTACTTTGATCAAGCTTTTGACT 1454314 Query 280224 GGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTAC 280283 || || | | || | || | || ||||||||||||||| |||| || ||||| Sbjct 1454313 GGTGAAATGGAAGCTGATACTGGTACTGTCTGGAAGCATCCCAACTTGCGTATCGCTTAT 1454254 Query 280284 GTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATAC 280343 || || || ||||||||||||||||| || || ||| ||||| ||||||||| | ||| Sbjct 1454253 GTTGCCCAACACGCTTTCCACCACATTGAAAAGCACTTGGACTCTACTCCTAACGAGTAC 1454194 Query 280344 ATTCAGTGGCGCTATGCAAGTGGGCAGGATC 280374 ||||| ||||| ||||| | ||| | |||| Sbjct 1454193 ATTCAATGGCGTTATGCTACTGGTGAAGATC 1454163 Score = 150 bits (166), Expect = 4e-31 Identities = 446/678 (66%), Gaps = 15/678 (2%) Strand=Plus/Minus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| ||||| ||||||||||| || || || |||| ||||| || || ||| || Sbjct 2584554 TGTCTGGTGGATGGAAGATGAAACTTGCTCTTGCTCGTGCCATGCTCATGAATGCTGACA 2584495 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 | | || ||||| || |||||||| ||| |||| ||| || || ||||| | Sbjct 2584494 TTTTGCTTCTTGACGAACCAACCAATCACTTGGATGTTGTCAATGTTGCTTGGCTCGAAA 2584435 Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCC 279885 |||| | || |||||| ||| |||| ||||||| |||||||||||||||||| Sbjct 2584434 ACTACTTGCTTGGTTTGAAGAGTGTCACTTCTATCATTGTTTCTCACGACTCTGGCTTCT 2584375 Query 279886 TAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGC--- 279942 | ||| |||||| || | |||||| || ||||| | ||| ||||| ||||| Sbjct 2584374 TGGATCACGTGTGTTCAGACATCATCCATTATGAAAAGAATTACAAGCT---CAAGCGCT 2584318 Query 279943 ACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGACC 280002 ||| ||||| || || | || || ||| |||| || || | || ||| Sbjct 2584317 ACAAGGGCAATCTTTCAGAATTTGTCAAGAAGGTTCCTGCTGCAGCATCTTATTATTCAT 2584258 Query 280003 TGAAGGACGCCACCG-CCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCACA 280061 || ||| | | | | ||| | | |||||||| || || | | |||| || |||| Sbjct 2584257 TGGAGG-CATCTCAGATCAATTTCAAGTTCCCTGAACCTGGTTATTTGGAAGGTATCAAG 2584199 Query 280062 TCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGC-TTATCC---CAATGG 280117 | ||||| || || ||| | ||| | || | ||| | ||||| | || Sbjct 2584198 ACCAAGGAACGTGCCATCCTCAAGATGAAGAATGT-TGATTTCCAATATCCTGGTACTGC 2584140 Query 280118 CCCCAA-CATCTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCA 280176 | || || | ||| | | | | |||| ||| | || || | | ||| | Sbjct 2584139 TCGTAAGCAGC-TCAAGAACATTAGCATGCAGTGTTCACTTTCTTCTCGTGTGGCTGTGA 2584081 Query 280177 TTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGG 280236 |||| ||||||||||| || ||||||||| | || | | ||||||| || | | | Sbjct 2584080 TTGGTCCCAATGGTGCTGGCAAGTCTACCTTGATTCGACTTTTGACTGGTGAAATGGAAG 2584021 Query 280237 CCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACG 280296 | | || | || ||||||||||||||| |||| || || || || || || || | Sbjct 2584020 CTGATACTGGTACTGTCTGGAAGCATCCCAACTTGCGCATTGCCTATGTTGCCCAACATG 2583961 Query 280297 CTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCT 280356 | ||||| ||||| || || || || |||| |||||| || |||| || || ||||| | Sbjct 2583960 CATTCCATCACATTGAAAAGCATCTTGACAAGACTCCCAATGAATATATCCAATGGCGTT 2583901 Query 280357 ATGCAAGTGGGCAGGATC 280374 |||| | ||| | |||| Sbjct 2583900 ATGCTACTGGTGAAGATC 2583883 Score = 113 bits (124), Expect = 9e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 280638 CCTCTGACTGCCAAGAATGTTGAGGACCATATGACCAAGCTGGGTCTGGACCCCGAGTTT 280697 ||| ||||| ||||| | ||||| | || ||| | | ||| |||| || || ||| Sbjct 1453890 CCTTTGACTTCCAAGGAGATTGAGAAGCACTTGAATGAAGTTGGTTTGGAACCTGAATTT 1453831 Query 280698 ACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGA 280757 | ||||||||||| ||||| ||||||||||| || || |||||||| | || || || Sbjct 1453830 GCCACTCACTCTCGTATTCGTGGTCTTTCTGGTGGACAAAAGGTCAAGTTGGTTATTGGT 1453771 Query 280758 GCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGAC 280817 || || ||||| | | |||||| || | ||||| ||||| |||||||| || |||| Sbjct 1453770 GCTGCCATGTGGAATCGTCCTCACATGTTGGTTCTTGACGAACCTACCAATTACTTGGAT 1453711 Query 280818 CGCGA 280822 || || Sbjct 1453710 CGTGA 1453706 Score = 113 bits (124), Expect = 9e-20 Identities = 177/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 280638 CCTCTGACTGCCAAGAATGTTGAGGACCATATG-ACCAAGCTGGGTCTGGACCCCGAGTT 280696 ||||| ||||||||| | ||||| | ||| || | ||| ||| | |||| || || || Sbjct 2583610 CCTCTCACTGCCAAGGAAATTGAGAAACATTTGGATGAAGTTGGTT-TGGAACCTGAATT 2583552 Query 280697 TACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGG 280756 | | ||||| ||||| ||||| ||||||||||| || || || ||||| | || || || Sbjct 2583551 TGCTACTCATTCTCGTATTCGTGGTCTTTCTGGTGGTCAAAAAGTCAAGTTGGTGATTGG 2583492 Query 280757 AGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGA 280816 || || ||||| | | ||||| || | || || ||||| |||||||| ||||| || Sbjct 2583491 TGCTGCCATGTGGAATCGTCCTCATATGTTGGTGCTTGACGAACCTACCAATTATCTTGA 2583432 Query 280817 CCGCGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGT 280876 || || || || ||||| || |||| | | || ||| || ||||| || | Sbjct 2583431 TCGTGATTCTCTTGGTGCTCTTGCTGGTGCTATTAAGCAATATGGTGGTGGCGTTGTCAT 2583372 Query 280877 CATTTCTCACA 280887 || |||||| Sbjct 2583371 TGTTACTCACA 2583361 >seq34 Length=2204315 Score = 176 bits (194), Expect = 9e-39 Identities = 459/690 (67%), Gaps = 25/690 (4%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || ||| |||| ||||| |||||||||||| |||| || | || ||||| | || | Sbjct 1922797 GGCTCTTTGTCTGGTGGATGGAAGATGAAGTTGGCTCTTGCACGTGCCATGTTGATGAAT 1922738 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 || ||| || | || | ||||| || ||||| ||| |||| ||| || || ||| Sbjct 1922737 GCTGATATCTTGCTTTTGGATGAACCTACCAATCACTTGGATGTTGTCAATGTTGCATGG 1922678 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 |||| | ||| || | |||||| ||| |||| ||||||| || ||||| ||| Sbjct 1922677 CTAGAGAACTATCTGCTTGGCTTGAAGACTGTCACTTCAATCATTGTGTCCCACGATTCT 1922618 Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCC 279938 ||||| | ||| |||||| |||| |||||||||||||| ||| |||||| Sbjct 1922617 GGCTTTTTGGATCACGTGTGTTCTGATATCATTCACTATGAAGGCAATTACAAGCTC--- 1922561 Query 279939 AAGC---ACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTAC 279995 |||| ||| ||||| || |||| || || ||| ||| || || || ||| Sbjct 1922560 AAGCGATACAAGGGCAATCTTTCTGAATTTGTCAAGAAGGTGCCTCGTGCTGCTGCTTAC 1922501 Query 279996 TATGACCTGAAGGACGC-CACC-GCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGG 280053 ||| || | | || || | || | | ||||| |||||||| | ||| || | Sbjct 1922500 TATTCATTGGATGCTGCTCAGTTGACA--TTCAAGTTCCCAGAGCCAGGATATCTTGAAG 1922443 Query 280054 GCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCA 280113 | ||| ||||||| || || || | ||| | | || |||| ||||| Sbjct 1922442 GTGTCAAGACAAAGGAACGTGCTATTCTCAAGATGAAGGATGTTGACTTTCAGTATCC-- 1922385 Query 280114 ATGGCCC--CAA-----CATCTTCAGCAGTGTCAACTCGCAGGTTTC--TATGAACTCAC 280164 |||| | ||| || || || | | | | ||| ||| || || || Sbjct 1922384 -TGGCACTTCAAGAAAGCAGCT-CAAAGGCATTACCATGCAATGTTCATTAGCAAGTCGT 1922327 Query 280165 GGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTG 280224 | | | ||| ||||| ||||||||||| || ||||| || || |||||| | |||||| Sbjct 1922326 G--TGGCTGTGATTGGTCCCAATGGTGCAGGCAAGTCAACTCTGATCAAATTGTTGACTG 1922269 Query 280225 GCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | |||| | | ||| || | |||||||||||||||||| |||| || ||||| | Sbjct 1922268 GTGAGATGGAACCTACTTCTGGTACTGTTTGGAAGCATCCCAACTTGCGTATTGCTTATG 1922209 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 | || || || |||||||| ||||| ||||| || |||| || || || |||||| Sbjct 1922208 TTGCACAACATGCTTTCCATCACATTGAGAAGCATTTGGATTCTACACCCAATGAATACA 1922149 Query 280345 TTCAGTGGCGCTATGCAAGTGGGCAGGATC 280374 |||| ||||| ||||| | ||| | |||| Sbjct 1922148 TTCAATGGCGATATGCTACTGGTGAAGATC 1922119 Score = 104 bits (114), Expect = 5e-17 Identities = 179/259 (69%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 280642 TGACTGCCAAGAATGTTGAGGACCATATGACCAAGCTGGGTCTGGACCCCGAGTTTACAA 280701 ||||||||||| | |||| | ||| | | | ||||||| || || || ||| | | Sbjct 1921842 TGACTGCCAAGGAGATTGAAAAGCATCTATCTGAAGTGGGTCTTGAGCCTGAATTTGCTA 1921783 Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAG 280761 | || ||||| ||||| ||||| ||||| || || || |||||| | || || || || | Sbjct 1921782 CACATTCTCGTATTCGTGGTCTCTCTGGTGGACAAAAAGTCAAATTGGTTATTGGTGCTG 1921723 Query 280762 CTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCG 280821 | ||||| | | ||||| || | || || ||||| |||||||| ||||| || || | Sbjct 1921722 CCATGTGGAATCGTCCTCATATGTTGGTACTTGACGAACCTACCAATTATCTTGATCGTG 1921663 Query 280822 AGAGCCTGGGCGCTCT---GAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCA 280878 | || || ||||| |||||| || || || ||| ||||| || || | Sbjct 1921662 AATCACTTGGTGCTCTTGCAAGTGCTATTCGTGA---ATATGGTGGCGGTGTTGTCATTG 1921606 Query 280879 TTTCTCACAGCACAGAATT 280897 || |||||| | |||||| Sbjct 1921605 TTACTCACAACCGAGAATT 1921587 >seq45 Length=1879501 Score = 100 bits (110), Expect = 6e-16 Identities = 173/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 251525 TCATCACACCTGGACGTTGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCT 251584 |||| ||||| | |||||| || ||||||||||| |||||| || || | ||||| | Sbjct 1418068 TCATGACACCAGCACGTTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTT 1418127 Query 251585 CCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTG-GGATGG 251643 |||||||| | ||||| ||||| || || || || |||||||| |||||| || Sbjct 1418128 GAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTAGCATTGTAATGCTTGTTGAGAC 1418187 Query 251644 CCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAG 251703 ||||| || || | | ||| || || ||||| || | || || | ||| || | | Sbjct 1418188 CCAAG-GCGACAAGCAAGCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCA 1418246 Query 251704 TTCATGCCAATCATACGACA-AGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAAC 251762 ||||| ||||||| |||| |||| || ||| | |||||| | ||| | ||||| Sbjct 1418247 TTCATACCAATCA-GGGACACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAAC 1418305 Query 251763 TGCCTC 251768 || || Sbjct 1418306 AGCTTC 1418311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835825482234