Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq12 114 2e-20 >seq12 Length=2893134 Score = 114 bits (126), Expect = 2e-20 Identities = 321/490 (66%), Gaps = 2/490 (0%) Strand=Plus/Plus Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 |||||| || ||||| || ||||| || || | | | |||| ||||||||| ||||| Sbjct 1077840 GCTGGCAAGATTGCATACAGCCACTTCATCAGGACTTGAATACTCGACAATCTCTGTGCA 1077899 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 || || ||||| ||||||||||||| || || |||||||| ||| ||||| || || Sbjct 1077900 AAGATTGCTGCATTTGATGGTGCCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATC 1077959 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 |||||| | |||||| || || || || || || || | | || | ||| || Sbjct 1077960 CTTGTATAACATGAATGGACCACCAGTTTCAGTTTGTGCTTCCAAGATAGCATACCAAAG 1078019 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 | |||||||| | | || || || || ||| || || |||| | Sbjct 1078020 CTTTTGTGCCTTGACAACCTTACGTGCACGTCCTTCACGCTCATATTGGTGATACAACTC 1078079 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGT-CTAGGCCGGGGCACGACGCCGGGCACATGAGAC 244982 ||| || || ||||| || || | | | | || || || ||||| | ||||| Sbjct 1078080 CTCAAATTCTTTTCCCCAAACTTCATGCAATCCAGGTGCTTCAC-TTGGGCAAAAGAGAC 1078138 Query 244983 TCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 |||| || || |||| || | |||||||| | ||| || ||||| | ||| | | Sbjct 1078139 TCCAATCACCATTTTCCTCAACACGTTGCATGAACAAGTCTGGAATCCACAAGGCATAAA 1078198 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 | | || | | | | || || |||| |||||| | | ||||||||||||| Sbjct 1078199 ACAAATCACGTGCACGATTTTCTTCTTTGCCATGGTTCTTGCGTAAATCCAAAAAGTCAA 1078258 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 |||| || ||||| || || | |||| || | || || || |||||||| || | Sbjct 1078259 AGACATCAGGATGCCATGGTTCAAGATAGATGGCAAATGCACCAGGTCGCTTGTTACCAC 1078318 Query 245163 CCTGGTCCAC 245172 | || ||||| Sbjct 1078319 CTTGATCCAC 1078328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338326486240