Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq45 102 1e-16 seq74 96.9 4e-15 >seq45 Length=1879501 Score = 102 bits (112), Expect = 1e-16 Identities = 159/223 (71%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATT-CGAGAAGCACAGTCC 126105 ||||| || ||| ||||| || |||||||| ||||| ||||| | | ||| || || Sbjct 1418376 GCAAAATCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAG-CC 1418434 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| ||||| || ||||| | ||| || || | | ||| || || || |||||||| Sbjct 1418435 TGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGAT 1418494 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 || || ||| || || |||| ||||| ||||||||||| | | ||| | ||| Sbjct 1418495 GCCTTCTACAGCAGCAAAAGCAACAAGACGTTCAGCAAAGGAAC----CATTGGATGAAA 1418550 Query 126226 -CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 |||||| | ||||| | || || |||| ||| || || || Sbjct 1418551 TCCACTTGAAGGCCCAGTCAGCTTTCTTCTTGATGCAAGGAAC 1418593 >seq74 Length=1162362 Score = 96.9 bits (106), Expect = 4e-15 Identities = 257/389 (66%), Gaps = 4/389 (1%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| ||| | || ||| ||| ||||||||| ||| | || ||||| || Sbjct 830372 TACCAAGCTTCTACTTCCGAGTTGTATGGTAAAGTGGTTGAAACTCCACAAAAGGAAACC 830431 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || || |||||||| || || |||||| || | ||| | | | ||| || Sbjct 830432 ACTCCTTTCTATCCTCGTTCACCCTATGGTGTTGCCAAGTTATATGGTTACTGGATCACT 830491 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 || || || |||||||||| | | | ||| ||| |||||||||||||| ||||| Sbjct 830492 GTCAACTATCGTGAATCCTATGATATGTATGCATGCAATGGTATTCTCTTCAATCACGAA 830551 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAAT- 8764 || || || ||||||| ||| ||||||| |||||||| || | | | || Sbjct 830552 TCTCCACGCCGTGGCCGTACTTTTGTGACAAGAAAGATCACTCGTGCTGTTGCTGATATC 830611 Query 8765 CGTCGCGGGTGAGAGGGAGTTCATTGAAT-TGGGGAACCTCAACGCCGAGAGGGACTGGG 8823 | | || | | | | | ||| || | || ||| | | ||| || | || |||| Sbjct 830612 CATTTGGGACGTCAAGAA--TGTTTGTATCTTGGTAACATTGATGCCAAGCGTGATTGGG 830669 Query 8824 GACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACG 8883 | || || |||||||| |||| |||||||||| | ||||||||||| || | || | Sbjct 830670 GTCATGCTCGTGACTATGTCGAAGGCATGTGGCTCATGCTTCAACAAGACAAGCCTGAAG 830729 Query 8884 AATATGTCGTCGCGACGGGGGAGACACAC 8912 | | ||| | || || || || || ||| Sbjct 830730 ACTTTGTTTTGGCCACTGGTGAAACTCAC 830758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353047447920