Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq73 118 1e-21 seq12 114 1e-20 >seq73 Length=1220876 Score = 118 bits (130), Expect = 1e-21 Identities = 476/745 (64%), Gaps = 5/745 (1%) Strand=Plus/Plus Query 93888 CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTT 93947 |||||| | || ||| ||||||| || || || || |||||| ||||||| || || Sbjct 414325 CATGGC-AGTCCTACCTTGTTCAATGCTGGTACTCCACGTCCACAGCTGTCTTCCTGCTT 414383 Query 93948 CCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGC 94007 | || |||| | |||| || || || || |||| || | || ||| |||||| Sbjct 414384 CTTGTTGACCATGAAGGATGATTCAATTGAAGGCATTTATGAGACACTAAAGACCTGTGC 414443 Query 94008 GACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG 94067 | || || || || || || || || | | | ||||| || | ||||| | || Sbjct 414444 CAAGATTTCCAAGACAGCAGGTGGTATTGGTCTTAATATCCACAACATTCGTGCTACTGG 414503 Query 94068 TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTT 94127 || ||||| ||||||||||| ||||||||| | || || ||| | || || || Sbjct 414504 ATCTTACATTGCTGGTACCAATGGATATTCCAACGGCATTGTTCCCATGTTACGTGTGTT 414563 Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187 |||||| | || || || ||||| || |||||| | | | ||| | || || | Sbjct 414564 CAACAATACAGCTCGTTATGTGGATCAAGGTGGTAACAAGCGACCTGGTGCATTTGCCAT 414623 Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGG 94247 ||| | || || ||||| | || ||| | || | || |||| |||||||| || Sbjct 414624 GTATTTGGAACCATGGCATCCTGATGTGTTTGACTTTTTGGATTTGCGCAAGAACCATGG 414683 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 ||| || | | | || | || | || || || | ||| | |||||| | ||||| Sbjct 414684 CAAGGAAGAGAATCGTGCACGTGATTTGTTTTATGCCTTGTGGATTCCAGACATGTTTAT 414743 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 | ||| || || |||| | |||||||| || ||||| ||||| || ||| | Sbjct 414744 GCGACGTGTGGAAGAAAATGGTGATTGGAGTCTCTTCTGTCCTGATGAAGCACCTGGATT 414803 Query 94368 GTCCGACGTTTGTG--GATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425 || || || | ||| || ||||| || || || | || ||| | || Sbjct 414804 ACAAGATGTATGGGGTGAT-GC-ATTTGATGAATTATACTTGAGATATGAACGTGAAGGT 414861 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTG 94485 || | ||||| | | || || || ||| || || |||| | ||| Sbjct 414862 CGTGCACGTAAGGTGGTCAAGGCACAAAAACTTTGGTATGCCATTTTGGAAGCACAAACA 414921 Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 || || ||| || | ||| || | |||||| | ||| ||| ||||| ||||| Sbjct 414922 GAAACTGGTGGTCCATTCATGTTATACAAGGATGCATGCAATCGCAAATCCAATCAGCAA 414981 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 || | || ||||| || ||||| ||||| || |||||||||||| ||||||| Sbjct 414982 AACTTGGGTACCATCAAATGCAGCAATCTTTGCACAGAAATTGTCGAGTATTCTTCTCCT 415041 Query 94606 GACGAGATTGCTGTGTGTAACCTGG 94630 || || | ||||| || || |||| Sbjct 415042 GATGAAGTGGCTGTATGCAATCTGG 415066 >seq12 Length=2893134 Score = 114 bits (126), Expect = 1e-20 Identities = 470/739 (64%), Gaps = 4/739 (1%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||| || || || ||||| || || || || ||||| | || || |||||| || Sbjct 1078583 GCCAGTCCAACACTTTTCAATGCCGGCACACCTCGTCCACAATTATCATCATGTTTCTTG 1078524 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 |||| | |||| |||||||| || || | || | |||||| | ||| || Sbjct 1078523 TTGACTATGAAGGAAGACTCCATTGAAGGCATCTATGAGACACTCAAGA--TTTGCTCCC 1078466 Query 94012 A--TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 | | ||||| || || || || || | | | ||||| || | ||||| || | Sbjct 1078465 AGATTTCAAAGACGGCAGGTGGTATTGGTCTTAATATCCACAACATTCGTGCATCTGGCT 1078406 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | || || |||||||||||| ||||| ||| | || || ||||| || || | || Sbjct 1078405 CATATATTGCTGGTACCAATGGCTATTCCAATGGCATTGTGCCCATGCTACGTGTATACA 1078346 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 |||| | || ||||| ||||| || |||||| | | | ||| | || || ||| Sbjct 1078345 ACAATACTGCTCGCTATGTGGATCAAGGTGGTAACAAGCGACCTGGTGCATTTGCCATCT 1078286 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 |||| || || ||||| | || || | || | || | || |||||||| |||| Sbjct 1078285 ATCTTGAACCATGGCATCCTGATGTCTTTGACTTTTTGGATTTACGCAAGAACCATGGCA 1078226 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || | | || | || | || || || | ||| | |||||| | || ||| Sbjct 1078225 AAGAAGAAAATCGTGCACGTGATTTGTTTTATGCCTTGTGGATTCCAGACTTGTTCATGC 1078166 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 |||| || ||| |||| | |||||||| ||||| || | |||| || ||| || Sbjct 1078165 AACGTGTTGAGGAAAATGGTGATTGGAGTCTCTTTTGCCCAAGTGAAGCACCTGGATTGC 1078106 Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 || ||||| ||| ||||| || |||||| | || || | || | Sbjct 1078105 ATGAAGTTTGGGGAAAAGAATTTGAGGAGTTGTATCACCAATATGAGCGTGAAGGACGTG 1078046 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | |||||| | | || ||||| ||| || ||| |||| | ||| || | Sbjct 1078045 CACGTAAGGTTGTCAAGGCACAAAAGCTTTGGTATGCTATCTTGGAAGCACAAACTGAAA 1077986 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | ||| || | ||| || | |||||| | ||| ||| ||||| ||||| || Sbjct 1077985 CTGGTGGTCCATTCATGTTATACAAGGATGCATGCAATCGCAAATCCAATCAGCAAAACT 1077926 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||||| || ||||| ||||| ||||||||||||||| | ||| || | Sbjct 1077925 TGGGCACCATCAAATGCAGCAATCTTTGCACAGAGATTGTCGAGTATTCAAGTCCTGATG 1077866 Query 94610 AGATTGCTGTGTGTAACCT 94628 | | ||||| || || || Sbjct 1077865 AAGTGGCTGTATGCAATCT 1077847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722742381040