Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq74 100 3e-16 >seq74 Length=1162362 Score = 100 bits (110), Expect = 3e-16 Identities = 259/391 (66%), Gaps = 8/391 (2%) Strand=Plus/Plus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || ||||| ||| | || ||| ||| ||||||||| ||| | |||||||| || Sbjct 830372 TACCAAGCTTCTACTTCCGAGTTGTATGGTAAAGTGGTTGAAACTCCACAAAAGGAAACC 830431 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560 || || |||||||| || || |||||| || | ||| | | | ||| || Sbjct 830432 ACTCCTTTCTATCCTCGTTCACCCTATGGTGTTGCCAAGTTATATGGTTACTGGATCACT 830491 Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620 || ||||| |||||||||| | | | || ||| |||||||||||||| ||||| Sbjct 830492 GTCAACTATCGTGAATCCTATGATATGTATGCATGCAATGGTATTCTCTTCAATCACGAA 830551 Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATC 10680 || || || ||||||| ||| ||||||| |||||||| || | | | ||| Sbjct 830552 TCTCCACGCCGTGGCCGTACTTTTGTGACAAGAAAGATCACTCGTGCTGTTGCTGATATC 830611 Query 10681 ---GTGGCGGGTGAGAGGGAGTTCATTGAAT-TGGGGAACCTCAACGCCGAGAGGGACTG 10736 ||| || | || || ||| || | || ||| | | ||| || | || || Sbjct 830612 CATTTGGGACGTCA-AGAATGT---TTGTATCTTGGTAACATTGATGCCAAGCGTGATTG 830667 Query 10737 GGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGA 10796 ||| || || |||||||| |||| |||||||||| | || |||||||| || | || Sbjct 830668 GGGTCATGCTCGTGACTATGTCGAAGGCATGTGGCTCATGCTTCAACAAGACAAGCCTGA 830727 Query 10797 CGAATATGTCGTCGCGACGGGGGAGACACAC 10827 || | ||| | || || || || || ||| Sbjct 830728 AGACTTTGTTTTGGCCACTGGTGAAACTCAC 830758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506632505840