Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 3e-12 seq2 86.0 1e-11 seq73 84.2 3e-11 >seq12 Length=2893134 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || || |||| || || | ||| ||||| | | | | |||||||||||| ||| Sbjct 1076867 TCGACTGTAAACTTGATAGCATCCACAGCAGGACGAGTGCGTAAATAGTACATGCCAGTC 1076926 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || || |||| ||| || || | ||||||| || || |||| | ||| || || Sbjct 1076927 TTAAGACCTTTCTTCCAGCCATAAAAGTGCATGCTAGTCAACTTGCCAAAGTTTGGTTCA 1076986 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 | ||| |||||||| || || || || || | | ||||| ||||| || ||||| Sbjct 1076987 CCAATGAAAATGTTCAAGCTTTGACTCTGATCAAT-ATAAGCGCCACGATCGGCTGCCAT 1077045 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || || ||||| || |||| |||||| || |||||| Sbjct 1077046 ATCAATGATGGTACGTTGAGAAAGCTCCCATACAGTCTTG 1077085 >seq2 Length=1153633 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/221 (70%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG-- 159970 ||||| ||| || ||||| ||| || | ||| || || || || || | |||||| Sbjct 770566 AAACAAGAGACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACT 770507 Query 159971 GACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA 160030 || ||| | || || ||||| | |||||| |||||||||||| || | ||||||| | Sbjct 770506 GA-ATG-TAAGACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAA 770449 Query 160031 CCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCG 160090 || ||| ||||| || ||||| || || || || || || | ||| ||||||| | Sbjct 770448 CCAGAAAAGAAGATGCCTTCCACTGCAGCGAATGCAACTAGACGTTCAGCAAAAGATCCA 770389 Query 160091 TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131 |||| | | |||| | |||||||| |||||||| Sbjct 770388 TTGG---AAGAGATCCATCGAAATGCCCATTCTGCCTTCTT 770351 >seq73 Length=1220876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 ||||| || |||| || || | || ||||| | ||||| |||||||||||||||| Sbjct 416000 TCCACAGTAAACTTGATAGCATCGACAGCAGGACGTGATCTCAAATAGTACATGCCGGTC 415941 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||| | ||| || || | |||||| | || |||| | |||||| ||| Sbjct 415940 TTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTTGTGAGCTTGCCAAAGTTGGGTTCG 415881 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 | ||| || |||| | || || || || || |||||| || ||||| || ||||| Sbjct 415880 CCAATGAAGATATTCAAACTTTGACTCTGATCAAT-AAAGGCACCACGATCAGCAGCCAT 415822 Query 204022 ATTGATAATG 204031 || || ||| Sbjct 415821 ATCAATGATG 415812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154464481440