Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq45 118 1e-21 >seq45 Length=1879501 Score = 118 bits (130), Expect = 1e-21 Identities = 421/647 (65%), Gaps = 16/647 (2%) Strand=Plus/Minus Query 154443 ATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTG 154502 ||| |||| |||||| ||| || ||||| | ||||| | | ||| | | ||||| Sbjct 1332683 ATGATTCCTCTTGGCTCTTGTACTATGAAGCTTAATGCTACTACTGAAATGGTACCTGTC 1332624 Query 154503 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT-ATGATACAGACCATGGGTTA 154561 | ||| || |||| |||| | ||||| | | ||| | ||| || || || || Sbjct 1332623 ACTTGGCCTGAATTTGGTAACATCCATCCTTTTGCTCCTGAAGAT-CAAACTGAAGGCTA 1332565 Query 154562 TCAGAAAATTATAGATGACTTACAGAAATGGTTATG-TGATATCACAGGGTTTGATTCTA 154620 || | || | ||||| || | || | | || ||| ||||| || |||||| Sbjct 1332564 TCGTATCATGCTTGATGAATT-CTCCAAGGATCTTGCTGAAATCACTGGTTTTGATGAAG 1332506 Query 154621 TATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAG 154680 | ||||| ||||| ||| | || | || ||||| ||||| || || || || | Sbjct 1332505 TGTCATTGCAACCAAACTCTGGTGCCCAAGGTGAATATGCTGGTCTACGTGCCATTGGTG 1332446 Query 154681 CATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCAC 154740 | |||||| || | || || | | | ||||| || ||||| || || || | Sbjct 1332445 CCTACCATGAATCACGTGGTGAAGCACATCGTAATGTGTGCTTGATCCCTATCTCTGCTC 1332386 Query 154741 ATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTG 154800 |||| || || |||||| ||||| ||||| || ||| | ||||| ||||||||||| Sbjct 1332385 ATGGTACCAACCCTGCTTCTGCTGCTATGGCTGGTATGGATGTTGTCATTGTCAAGTGTG 1332326 Query 154801 ATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTG 154860 || | |||| || | || || ||||| || || || | | | |||| | Sbjct 1332325 ATAACAATGGCAATTTGGATATGGCTGATCTTAAGGCTAAGGC--TGAGAAGTACAA--G 1332270 Query 154861 AACTGTCATG----TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAAC 154916 || | | || | | ||| | || || ||||| || |||| | |||||| || Sbjct 1332269 GACAGACTTGCTGCTTTCATGGTGACTTATCCATCCACTTTTGGTATGTTTGAACCTGGT 1332210 Query 154917 ATTA--GACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAG 154974 || || || | ||| ||| ||||| | |||||||||| || || | ||||| | Sbjct 1332209 GTTGTTGA-AGCT-TGTGAGACTGTTCACAAGTATGGTGGTCAAGTTTACATGGATGGTG 1332152 Query 154975 CAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTC 155034 | ||||| ||||| || | || || | || || || |||||| ||||| |||| Sbjct 1332151 CCAATCTTAATGCCCAAATTGGTCTTACCAAGCCTGCCGAAATTGGTGCTGATGTTTGTC 1332092 Query 155035 ATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGT 155081 | | ||||| || || || ||||||||||| ||||| ||||| ||| Sbjct 1332091 ACATGAACTTGCACAAGACTTTCTGTATTCCTCATGGTGGTGGTGGT 1332045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212264228160