Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq45 145 9e-30 >seq45 Length=1879501 Score = 145 bits (160), Expect = 9e-30 Identities = 427/647 (66%), Gaps = 16/647 (2%) Strand=Plus/Minus Query 159118 ATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAACTGATGCCTGTG 159177 ||| |||| ||||| |||||||||||| || || || | | ||| || | ||||| Sbjct 1332683 ATGATTCCTCTTGGCTCTTGTACTATGAAGCTTAATGCTACTACTGAAATGGTACCTGTC 1332624 Query 159178 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT-ATGATACAGACCATGGGTTA 159236 | ||| || |||| |||| | ||||| | | ||| | ||| || || || || Sbjct 1332623 ACTTGGCCTGAATTTGGTAACATCCATCCTTTTGCTCCTGAAGAT-CAAACTGAAGGCTA 1332565 Query 159237 TCAAAAAATTATAGATGACTTACAGAAATGGTTATG-TGATATCACAGGGTTTGATTCTA 159295 || | || | ||||| || | || | | || ||| ||||| || |||||| Sbjct 1332564 TCGTATCATGCTTGATGAATT-CTCCAAGGATCTTGCTGAAATCACTGGTTTTGATGAAG 1332506 Query 159296 TATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAG 159355 | ||||| ||||| ||| | || | || ||||| ||||| || || || || | Sbjct 1332505 TGTCATTGCAACCAAACTCTGGTGCCCAAGGTGAATATGCTGGTCTACGTGCCATTGGTG 1332446 Query 159356 CATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCAC 159415 | |||||| || | || || | | | ||||| || ||||| || || || | Sbjct 1332445 CCTACCATGAATCACGTGGTGAAGCACATCGTAATGTGTGCTTGATCCCTATCTCTGCTC 1332386 Query 159416 ATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTG 159475 |||| || || ||||| || || | ||||| || ||| | ||||| ||||||||||| Sbjct 1332385 ATGGTACCAACCCTGCTTCTGCTGCTATGGCTGGTATGGATGTTGTCATTGTCAAGTGTG 1332326 Query 159476 ATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTG 159535 || | ||||||| | || || ||||| || || || | | | |||| | Sbjct 1332325 ATAACAATGGCAATTTGGATATGGCTGATCTTAAGGCTAAGGC--TGAGAAGTACAA--G 1332270 Query 159536 AACTGTCATG----TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAAC 159591 || | | || | | ||| | || |||||||| || |||| | |||||| | Sbjct 1332269 GACAGACTTGCTGCTTTCATGGTGACTTATCCATCCACTTTTGGTATGTTTGAACCTGGT 1332210 Query 159592 ATCA--GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTG 159649 | || || | ||| ||| |||||| || |||||||||| || || | ||||||| Sbjct 1332209 GTTGTTGA-AGCT-TGTGAGACTGTTCACAAGTATGGTGGTCAAGTTTACATGGATGGTG 1332152 Query 159650 CAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTC 159709 | ||||| ||||| || | ||||| | || || || |||||| ||||| |||| Sbjct 1332151 CCAATCTTAATGCCCAAATTGGTCTTACCAAGCCTGCCGAAATTGGTGCTGATGTTTGTC 1332092 Query 159710 ATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGT 159756 | | ||||| || ||||| ||||||||||| ||||| ||||| ||| Sbjct 1332091 ACATGAACTTGCACAAGACTTTCTGTATTCCTCATGGTGGTGGTGGT 1332045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050656052640