Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq45 123 3e-23 >seq45 Length=1879501 Score = 123 bits (136), Expect = 3e-23 Identities = 422/646 (65%), Gaps = 14/646 (2%) Strand=Plus/Plus Query 138206 ACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGC 138265 ||| ||||| ||||| ||||||||||| ||||| || || || | ||||| ||||| || Sbjct 1332045 ACCACCACCACCATGAGGAATACAGAAAGTCTTGTGCAAGTTCATGTGACAAACATCAGC 1332104 Query 138266 ACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATA 138325 |||| || || || | ||||| | || ||||| ||||| |||||||| | || Sbjct 1332105 ACCAATTTCGGCAGGCTTGGTAAGACCAATTTGGGCATTAAGATTGGCACCATCCATGTA 1332164 Query 138326 TACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC--TGATGTTTGTTTCAAAT 138383 || |||||||||| | ||||| ||| ||| | || || | | |||||| Sbjct 1332165 AACTTGACCACCATACTTGTGAACAGTCTCACA-AGCT-TCAACAACACCAGGTTCAAAC 1332222 Query 138384 ACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGT---TCAAATGTATTCATG 138440 | |||| ||| |||||||| || | ||| | | | ||| || |||| | | Sbjct 1332223 ATACCAAAAGTGGATGGATAAGTCACCATGAAAGCAGCAAGTCTGTC-CTTGTACTTCTC 1332281 Query 138441 ATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCT 138500 | || || || ||||| || || | ||||||| | ||||||||||||| Sbjct 1332282 A--GCCTTAGCCTTAAGATCAGCCATATCCAAATTGCCATTGTTATCACACTTGACAATG 1332339 Query 138501 ACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGT 138560 ||||| | ||| || ||||| | ||| |||||| || || ||||| || || || Sbjct 1332340 ACAACATCCATACCAGCCATAGCAGCAGAAGCAGGGTTGGTACCATGAGCAGAGATAGGG 1332399 Query 138561 ATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAAC 138620 |||| || ||||| | | | || || | || ||| || || || || Sbjct 1332400 ATCAAGCACACATTACGATGTGCTTCACCACGTGATTCATGGTAGGCACCAATGGCACGT 1332459 Query 138621 AGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCT 138680 || || ||||| ||||| || | || | ||| ||||| ||||| | ||||||||| Sbjct 1332460 AGACCAGCATATTCACCTTGGGCACCAGAGTTTGGTTGCAATGACACTTCATCAAAACCA 1332519 Query 138681 GTGATATCA-CATAACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTG 138739 ||||| ||| || | | || | || ||||| | || | |||| || || || Sbjct 1332520 GTGATTTCAGCAAGATCCTTGGAG-AATTCATCAAGCATGATACGATAGCCTTCAGTTTG 1332578 Query 138740 TATCAT-AGGTGTATGTGGATGCACGTTGGCAAATTCTTCCCATGACACAGGCATCAGTT 138798 ||| | ||| | | ||||| | ||| ||||||| ||| | ||||| | || || Sbjct 1332579 -ATCTTCAGGAGCAAAAGGATGGATGTTACCAAATTCAGGCCAAGTGACAGGTACCATTT 1332637 Query 138799 CTGCTGCTGCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCAT 138844 | | | ||||| || ||||| || ||| ||||| |||| ||| Sbjct 1332638 CAGTAGTAGCATTAAGCTTCATAGTACAAGAGCCAAGAGGAATCAT 1332683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997864426480