Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq45 96.9 5e-15 >seq45 Length=1879501 Score = 96.9 bits (106), Expect = 5e-15 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 ||||| |||||||||||||| | ||||||||| | ||| || | || || ||||| || Sbjct 1418370 AAACAAGCAAAATCAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTC 1418429 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||| | ||| | ||| || |||||||| || || || ||| | ||||||| Sbjct 1418430 AAGCCTGGCATAAGACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAG 1418489 Query 18275 AATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA 18318 || || || || || ||| || || || | | | ||||||||| Sbjct 1418490 AAGATGCCTTCTACAGCA-GCAAAAGCAACAAGACGTTCAGCAAA 1418533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871323018400