Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 113 8e-20 seq9 107 3e-18 >seq2 Length=1153633 Score = 113 bits (124), Expect = 8e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39125 ACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 39184 |||||||||||| |||||||| ||||| || | || |||| || ||||| || || | Sbjct 770557 ACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACTGAATGTAAG 770498 Query 39185 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 39244 |||||||| ||||| | |||||| |||||||| || || |||||| || ||||||||| Sbjct 770497 ACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACCAGAAAAGAA 770438 Query 39245 TATACCCTCCAC 39256 || || ||||| Sbjct 770437 GATGCCTTCCAC 770426 >seq9 Length=614693 Score = 107 bits (118), Expect = 3e-18 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 171840 ATACCACCTC-TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 |||||||| | |||| || | || ||||||||||| | ||| || |||||| ||||| Sbjct 95449 ATACCACCACGTAAG-CGAAGCACCAAATGTAAAGTCGACTCCTTTTGAATATTGTAATC 95391 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 || | | || | || || | |||||| ||||| ||||| | | || ||||| || Sbjct 95390 GGAAAGTGTACGACCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGTTGCTGGTCCGG 95331 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || |||||||| || || || || || | || || || |||| ||| || ||||| Sbjct 95330 AGGAATTCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTTTCAATAGAATCAGATGATTC 95271 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATA 172078 |||||| | || ||||| || ||||| | || || | || || |||||| | | ||| Sbjct 95270 TACTTCCAATGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATTTGCATTGTGTAATA 95211 Query 172079 AAA 172081 ||| Sbjct 95210 AAA 95208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135162749200