Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq23 105 1e-17 >seq23 Length=2259027 Score = 105 bits (116), Expect = 1e-17 Identities = 245/356 (69%), Gaps = 25/356 (7%) Strand=Plus/Plus Query 298925 TGGTGAAGCTGGTGTAGGTAAAACACAAATCATCGACGGGCTTGCACAAGCTATTGCTGA 298984 ||||||| ||||||| |||||||| || | || || ||||||| ||||| ||| Sbjct 1009743 TGGTGAACCTGGTGTTGGTAAAACTGCTATTGTGGAAGGACTTGCACGTCGTATTGTTGA 1009802 Query 298985 TGGTAACGTACCTGA-ACACCTGAAAGACGTTGAAA--TTCTTTCACTAAATGTTGGTGC 299041 || | || ||| | |||| | || || || || || | || | | ||||| Sbjct 1009803 GCGTGATGTTCCTCAGACACTTCAA------TGCAAGCTTTTTGCTCTTGACATGGGTGC 1009856 Query 299042 ATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTGCTAAA 299101 ||||| ||||||| | |||||||||||||||||||||||| | || | | | || || Sbjct 1009857 ATTGATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAAAGACTCAAGGCTGTACTCAA 1009916 Query 299102 AGAACT-AAAGAAACGTGAAAAT---ACTATTGTTTTCATTGATGAAATTCATATTATGG 299157 ||| | |||||| | | || || ||| |||||||||||||||| |||| || Sbjct 1009917 GGAAGTCAAAGAATC-TCAAGATGGCGTCATTCTTTTCATTGATGAAATCCATACAGTGC 1009975 Query 299158 TTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCAGCAC 299217 |||| |||||| | || | || || ||||| |||| |||| || || || Sbjct 1009976 TTGGTGCTGGT---AAAGGTGAAGGATCCATGGATGCTGCCAATTTGCTCAAACC--CAT 1010030 Query 299218 TTT--CACGTGGTGAGATTCG-TGTAATTGGTGCAACAACATATGA-TGAATATCG 299269 || |||||||||| | || ||| |||||||| || || | ||| |||||||| Sbjct 1010031 GTTGGCACGTGGTGAATTACGATGT-ATTGGTGCTACTAC-TTTGACAGAATATCG 1010084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115170142678306