Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 seq1 84.2 2e-11 >seq4 Length=1091430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || ||||||||||||||||| || ||||| ||| || Sbjct 753487 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTTTGGAAGTTGAATCCTCT 753546 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 |||||| ||| | || || | || || || || ||||| | || || || Sbjct 753547 GATTCTATTGAAAACGTTAAGAATAAGATCCAAGATAAGGAAGGTATTCCTCCAGACCAG 753606 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| | ||||| ||| | |||||| ||| || ||||||||| Sbjct 753607 CAACGTCTCATTTTTCGTGGCAAGCAACTTGAAGATGGCCGTACTTTGTCTGATTACAAC 753666 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| |||||||| || || || || Sbjct 753667 ATCCAAAAGGAATCTACTCTTCACTTGGT 753695 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || |||||||||||||||||||| ||||| || | Sbjct 753715 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACTTTGGAAGTTGAGTCTTCT 753774 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 |||||| ||| | || || | || || ||||| ||||| | || || || Sbjct 753775 GATTCTATTGAAAATGTCAAGAACAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAG 753834 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| ||||||||| | |||||| ||| || || |||||| Sbjct 753835 CAACGTTTGATCTTTGCAGGCAAACAACTTGAAGATGGCCGTACTTTGTCTGACTACAAC 753894 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| |||||||| || || || || Sbjct 753895 ATCCAAAAGGAATCTACTCTTCACTTGGT 753923 >seq1 Length=3088551 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106253 TTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGA 106312 ||| || |||||||| || || || || | ||||||||||| || ||| |||| || Sbjct 605558 TTTCAACATGCAAATCTTCGTCAAGACCCTTACTGGCAAGACTATCACCTTGGAGGTGGA 605617 Query 106313 ACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGT 106372 | ||||| ||| | || || | || ||| ||||| |||||| | ||| Sbjct 605618 GTCATCTGATTCCATTGAAAACGTCAAGAACAAGATTCAAGACAAGGAAGGCATTCCCCC 605677 Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 ||||| ||| | || || | ||| ||||||||| | |||||| | ||| || || Sbjct 605678 AGATCAGCAACGTCTCATCTTTGCAGGCAAACAACTTGAAGATGGTCGTACTTTGTCAGA 605737 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGT 106468 |||||||| ||||| || ||||| || || || || Sbjct 605738 CTACAACATTCAAAAGGAGTCTACTCTTCACTTGGT 605773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329237148992