Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq12 104 3e-16 >seq12 Length=2893134 Score = 104 bits (114), Expect = 3e-16 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || || || ||||||||||| || || || || || || || || ||||| Sbjct 1078577 CCAACACTTTTCAATGCCGGCACACCTCGTCCACAATTATCATCATGTTTCTTGTTGACT 1078518 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| || || || || ||||||||||| || |||||| ||| | | || || Sbjct 1078517 ATGAAGGAAGACTCCATTGAAGGCATCTATGAGACACTCAAGATTTGCTCCCAGATTTCA 1078458 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| |||| || || || ||| || ||||| | || || | ||| | || | Sbjct 1078457 AAGACGGCAGGTGGTATTGGTCTTAATATCCACAACATTCGTGCATCTGGCTCATATATT 1078398 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || ||||| ||| | ||||| ||| ||||||||||||| || || | ||| | || Sbjct 1078397 GCTGGTACCAATGGCTATTCCAATGGCATTGTGCCCATGCTACGTGTATACAACAATACT 1078338 Query 260165 GCGCGCTACGTCGACCA 260181 || ||||| || || || Sbjct 1078337 GCTCGCTATGTGGATCA 1078321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804062563988