Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq23 105 1e-17 >seq23 Length=2259027 Score = 105 bits (116), Expect = 1e-17 Identities = 245/356 (69%), Gaps = 25/356 (7%) Strand=Plus/Minus Query 332064 CGATATTCA-TCATATGTTGTTGCACCAATTACA-CGAATCTCACCACGTG--AAAGTGC 332119 |||||||| ||| | || || |||||||| ||| || | |||||||||| || || Sbjct 1010084 CGATATTCTGTCAAA-GTAGTAGCACCAAT-ACATCGTAATTCACCACGTGCCAACATG- 1010028 Query 332120 TGGCTTAAGCATATTGCTCATGTCCATAGAACCATTACTTGCGGAACCAGCCCCAACCAT 332179 || || |||| |||| ||||| || || | || | |||||| |||| || Sbjct 1010027 -GGTTTGAGCAAATTGGCAGCATCCATGGATCCTTCACCTTT---ACCAGCACCAAGCAC 1009972 Query 332180 AATATGAATTTCATCAATGAAAACAATAGT---ATTTTCACGTTTCTTT-AGTTCTTTTA 332235 |||| |||||||||||||||| ||| || || | | |||||| | ||| || | Sbjct 1009971 TGTATGGATTTCATCAATGAAAAGAATGACGCCATCTTGA-GATTCTTTGACTTCCTTGA 1009913 Query 332236 GCAAATTGTCGATGCGTTCTTCAAATTCACCACGATACTTAGTACCAGCAGTCAATGCAC 332295 | | | | || | |||||||||||||||||||||||| | ||||||| ||||||||| Sbjct 1009912 GTACAGCCTTGAGTCTTTCTTCAAATTCACCACGATACTTGGCACCAGCAATCAATGCAC 1009853 Query 332296 CAACATTTAGTGAAAGAA--TTTCAACGTCTTTCAGGTGT-TCAGGTACGTTACCATCAG 332352 | | | || | || || || || || | |||| | ||| || | || ||| Sbjct 1009852 CCATGTCAAGAGCAAAAAGCTTGCA------TTGAAGTGTCTGAGGAACATCACGCTCAA 1009799 Query 332353 CAATAGCTTGTGCAAGCCCGTCGATGATTTGTGTTTTACCTACACCAGCTTCACCA 332408 ||||| ||||||| || || | || |||||||| ||||||| ||||||| Sbjct 1009798 CAATACGACGTGCAAGTCCTTCCACAATAGCAGTTTTACCAACACCAGGTTCACCA 1009743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113829343949552