Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq17 96.9 3e-15 >seq17 Length=338404 Score = 96.9 bits (106), Expect = 3e-15 Identities = 241/363 (66%), Gaps = 21/363 (6%) Strand=Plus/Plus Query 111591 ATGAGGTCTATAATTCTCCAATTCAAAGTCATCAGCAACAAAATCGTCAATGCAAGCAAC 111650 |||||| ||||| | | |||||||||||| | |||||| |||||| || | | Sbjct 308752 ATGAGGATGATAATCTACTACTTCAAAGTCATCTACTCTAAAATCATCAATGGAATCGA- 308810 Query 111651 TCTT-CGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGT--AAGCTGTAATTG 111707 |||| ||| ||| || || || ||||| || || |||| || ||| || || Sbjct 308811 TCTTGCGTGCAATCTTGAGCTTAGGAAATGGACGTGG--TTCGCGTTCAAGTTGCTGTTT 308868 Query 111708 TAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCA 111767 || || | || || | | || ||||||| ||||| || || || ||||| | Sbjct 308869 TAGAGCATCGATATGGTCAACGTATACATGCGTGTCTCCCATCACGTGAATGAATTCTCC 308928 Query 111768 AGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTT 111827 ||| |||||| |||||| || |||||||| ||| | ||| ||| |||||||| Sbjct 308929 AGGTTCCAAATCAGTGACATGAGCAATCATCCTTGTCAAGAGAGCATAAGATGCAATGTT 308988 Query 111828 AAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGT----- 111882 ||||| ||||| || |||||||| | ||||| ||||| | ||| || ||| Sbjct 308989 GAATGGAACACCAAGACCCATATCGCATGATCTCTGATACATTGCACAGGAAAGTTGTCC 309048 Query 111883 -------TTATTT---TGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGC 111932 || ||| | ||| ||||| || ||||||| | || |||||||| || || Sbjct 309049 TTTTCCATTCTTTGGATTTGATACATAGAACTGACAAAAAGCGTGGCAAGGAGGTAAAGC 309108 Query 111933 CAT 111935 ||| Sbjct 309109 CAT 309111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945246514062