Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq9 123 2e-23 >seq9 Length=614693 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||| || ||||||||||| || ||| ||| |||| || ||| || Sbjct 95448 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATCACACTTGAAGTGGAATCGTCC 95507 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| ||||| | || || ||||| |||||| |||| || | Sbjct 95508 GATTCTATTGAGAAT--GTCAAGAACAAGATTCAAGACAAGGAAGGTATTCCTCCTGATC 95565 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| || ||||| || || ||||| | || |||| || | | || ||||||| Sbjct 95566 AGCAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGACGGCCGTACTCTTTCTGATTACA 95625 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||||| ||| ||||| ||||| || || ||||||||||| Sbjct 95626 ACATCCAAAAAGAATCCACGTTGCACTTGGTATTACGCTTGCGTGGCGG 95674 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| ||||| || ||||| ||||| || || ||| | || || ||| | Sbjct 95219 AATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACATTGGAAGTAGAATCATC 95278 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 || | | || ||||| ||||| || ||||| ||||| |||| ||| || Sbjct 95279 TGATTCTATTGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCA 95338 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| | ||||| || || |||||| | || || | || | | ||||||||||| Sbjct 95339 GCAACGTCTCATTTTCGCTGGCAAACAACTTGAAGATGGTCGTACACTTTCCGATTACAA 95398 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||| ||| ||||| |||||||| | || || ||||| || Sbjct 95399 TATTCAAAAGGAGTCGACTTTACATTTGGTGCTTCGCTTACGTGGTGG 95446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862079056598