Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20idahoensis_20var._20thermophila_20[genbank_20GCA_5F0009451 15.1_202014-08-05] 74 sequences; 30,708,998 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq73 298 8e-76 seq12 282 6e-71 seq45 156 6e-33 seq2 114 2e-20 >seq73 Length=1220876 Score = 298 bits (330), Expect = 8e-76 Identities = 1295/2033 (64%), Gaps = 49/2033 (2%) Strand=Plus/Minus Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 ||||||||| || || || || ||| ||||||| || || ||||| ||||| || || Sbjct 415956 ATAGTACATGCCGGTCTTGAGCCCCTTTTTCCATCCATAAAAGTGCATACTTGTGAGCTT 415897 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | | | | || ||| | || ||||||| ||||| ||||| || || || || Sbjct 415896 GCCAAAGTTGGGTTCGCCAATGAAGATATTCAAACTTTGACTCTGATCAATAAAGGCACC 415837 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 | |||||| ||||| | || ||| ||| || | |||||||| ||| ||| ||| Sbjct 415836 ACGATCAGCAGCCATATCAATGATGACACGTTGTGGTAGTTCCCAAACAGTCTTGTAAAG 415777 Query 77000 TTGTTTGATATCATCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAAT 77056 | || | |||||| |||| | | | | |||||| || || ||||| || || Sbjct 415776 ATTCTTCAAATCATCAGGAATGATAGGCACACGTTGAATAGAGCCGTTGTCTGACATGAT 415717 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTC--TCTGTTAAAACTCTAAGGAGATGA 77114 ||||||| | |||||| ||||| | | || | || ||| | | | | Sbjct 415716 CATATTCTTGACATCATCGTTCCAGA--TACCACGTTCCACCAAATCCTTCAACAACCAT 415659 Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 ||||| || ||||| ||||| |||| ||| || | ||| || || | || || || Sbjct 415658 GGATTGACAATTTGGAATTCACCAGCCAAGACACGACGTGTATACAAGTTGGATGTGTAA 415599 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | |||| ||| || | || || | || || ||||| |||||||| || Sbjct 415598 GGTTCAAAGCATTCGTTGAAACCAAGGATCTGTGATGTGGATGCAGTAGGCATAGGAGCT 415539 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 ||||| | ||| | | |||||| | | ||| || || || | |||||||| Sbjct 415538 ACCAAAAGTGAATTGCGTAAACCATGCTTGGCTACTTTTTCCTTGAGCAAAGTCCAATCC 415479 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT--CCGTTACTAGCAT 77352 || | ||| | |||| ||| |||| | || ||||| | ||| || || ||| Sbjct 415478 CATAAATCAGTAGGTGTCACACCCCACAAGTCATATTGCA--ATTGACCCTTGGATGCAG 415421 Query 77353 ATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCA 77412 || || | | || ||||||| || || | |||| | |||| ||||||| Sbjct 415420 GAGAACCTTGGAAAGTCTCATAAGCACCATCACGTGCAGCCAATTCAGTCGATGCTTCCA 415361 Query 77413 ATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTA 77471 || | | |||||| ||||| || |||| | ||| || | |||| |||||| | Sbjct 415360 CAGCAGCATGATAAATGGTTTCAAAGATCTGCAAATTAAGTTGCTTG-GCTTCAGGCGAA 415302 Query 77472 TCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATA 77531 ||||| || || | | | || || ||||| || | || ||||| || | ||||||| Sbjct 415301 TCAAATGGGAAACGCATCAACATGAAAGCATCAGCAAGACCTTGAACACCTAAACCAATA 415242 Query 77532 GGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATA 77591 || | ||| | |||||| || |||||| || | |||||||||||| ||||| || Sbjct 415241 GGACGATGACGACGATTGGATCGTTCAGCTTCAGGCACAGGATAATAATTGATGTCAATG 415182 Query 77592 ATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA- 77650 || || || | ||| | || || || || | | || || |||| ||||| Sbjct 415181 ATCTTGTTCAAATTACACGTTACCACCTTGGTGACATTATGTAACTTTTGAAAGTCAAAG 415122 Query 77651 ------------TCTTCCATCT-----ATAACAAACATGTTCAAAGCTATAGATGCTAGA 77693 || | ||| | ||||| ||| || ||| || ||| Sbjct 415121 GAAGCAGGAGTATCATGTGTCTTGCGCACCACAAAAGAAGGCAATGCAATACTGGCCAGA 415062 Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTA 77753 || || || || || |||| || | ||| | | || || || || ||||| || Sbjct 415061 TTGCATACAGCCACTTCATCAGGAGAAGAATACTCGACAATTTCTGTGCAAAGATTGCTG 415002 Query 77754 CATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGA 77813 |||||||| || |||| ||||| || ||| || |||||||| ||||| || | Sbjct 415001 CATTTGATGGTACCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTGTATAAC 414942 Query 77814 ATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 77873 || || ||| || ||||| | |||| ||| | ||| | | ||| | | || Sbjct 414941 ATGAATGGACCACCAGTTTCTGTTTGTGCTTCCAAAATGGCATACCAAAGTTTTTGTGCC 414882 Query 77874 TTTATCATAG-ATTTGTATCGCCTCTCTCTTTCATATTG--AGTATATAGCCGTTCAAAT 77930 || | || | || | ||| || | ||||||| |||||| | |||||| Sbjct 414881 TTGACCACCTTACGTGCACGACCT-TCACGTTCATATCTCAAGTATAATTCA--TCAAAT 414825 Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990 |||| ||||| ||||| | |||||||| ||||| || || | | ||| ||| Sbjct 414824 GCATCACCCCATACATCTTGTAATCCAGGTGCTTCATCAGGACAGAAGAGACTCCAATCA 414765 Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 |||| ||| | || ||| |||||| | || || ||||| | ||| ||| | ||| Sbjct 414764 CCATTTTCTTCCACACGTCGCATAAACATGTCTGGAATCCACAAGGCATAAAACAAATCA 414705 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110 || | | || ||||| || || ||||| | ||| | ||| || | | |||| Sbjct 414704 CGTGCACGATTCTCTTCCTTGCCATGGTTCTTGCGCAAATCCAAAAAGTCAAACACATCA 414645 Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170 | |||||||||||| | ||| || || | | |||||||| || ||||| || ||||| Sbjct 414644 GGATGCCATGGTTCCAAATACATGGCAAATGCACCAGGTCGCTTGTTACCACCTTGATCC 414585 Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCA 78230 | ||| | || || || || | || | ||||| |||| ||| ||||| || |||| Sbjct 414584 ACATAACGAGCTGTATTGTTGAACACACGTAACATGGGAACAATGCCGTTGGAATATCCA 414525 Query 78231 TTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT----CCCTAT 78286 || || |||| ||| ||| |||| | || ||||| || ||||||| || || Sbjct 414524 TTGGTACCAGCAATGTAAGATCCAGTAGCACGAATGTT----GTGGATATTAAGACCAAT 414469 Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346 || ||||| |||| || || || || || | ||| || || || || || || Sbjct 414468 ACCACCTGCTGTCTTGGAAATCTTGGCACAGGTCTTTAGTGTCTCATAAATGCCTTCAAT 414409 Query 78347 ACTGTCATCCATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 |||||| |||| || || ||| || ||| ||||| || || | ||| || | Sbjct 414408 TGAATCATCCTTCATGGTCAACAAG-AAGCAGGAAGACAGCTGTGGACGTGGAGTACCAG 414350 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTT 78465 |||| || || || ||| |||| ||||| | || || | | | ||| || | Sbjct 414349 CATTGAACAAGGTAGGACTGCCATGTGTAAAGAAACGCTCCGACATCAAGTGGTAAGTCT 414290 Query 78466 CAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 ||||||| || || || || ||| || || || || |||||||| | |||||| | Sbjct 414289 CAATAGCAGAATCGATATCTTCACCATGGATACCAACAGCAACACGCATAATCATATGTT 414230 Query 78526 GAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 78585 |||| | |||| | || || ||| || || | ||| || || ||||| || || | Sbjct 414229 GAGGACGTTCAGCTGTTTTGCCATTGATCTTGAGCAAATAAGAACGCTCCAATGTCTTGA 414170 Query 78586 AACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTT 78645 | || ||| ||||| | ||||| | |||||||| || |||| || || | || Sbjct 414169 AGCCGAAAAAGTTGAAGCTGAAGTCACGATCGTAAATGATGGCAGAGTTGAGCCTGTCAG 414110 Query 78646 TGTATTTGGTAACAATATCCATGACAGT-AGTTGAAATAATAGGAGATCGTACACCATTT 78704 | || | || | | |||| | | ||||| || ||||| | | Sbjct 414109 CATGCTTCATCACCACA-GCATGTGTTTCATCAGAAATCATGGGAGAATGCTTGTTGGTC 414051 Query 78705 TTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCC 78764 || ||||| |||||| || ||||| |||| || | | ||| | || || || ||| Sbjct 414050 TTGGGATTCACATAGCTATGCAAATCATCCACCACTTGAGAAAACACCTTCTTGGTCTCC 413991 Query 78765 TTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 ||||| | || || ||||| || | |||||| | | |||||||||||||| Sbjct 413990 TTGTGCAAGTTGGAAACAGCAATACGTGCAGCCAATACGGCATAATCAGGATG 413938 >seq12 Length=2893134 Score = 282 bits (312), Expect = 6e-71 Identities = 795/1210 (66%), Gaps = 18/1210 (1%) Strand=Plus/Plus Query 77688 GCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGA 77747 || ||||| || || || || |||| || | | ||| | | ||||| || || ||| Sbjct 1077844 GCAAGATTGCATACAGCCACTTCATCAGGACTTGAATACTCGACAATCTCTGTGCAAAGA 1077903 Query 77748 TTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTA 77807 || || |||||||| ||||||| ||||| || ||| || |||||||| ||||| Sbjct 1077904 TTGCTGCATTTGATGGTGCCCAAGTTTTGCTGATTGGATTTGCGATTGCATGCATCCTTG 1077963 Query 77808 TAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 77867 || | || || ||| || |||||| | |||| ||| | |||| | ||| | | Sbjct 1077964 TATAACATGAATGGACCACCAGTTTCAGTTTGTGCTTCCAAGATAGCATACCAAAGCTTT 1078023 Query 77868 CTAGCTTTTATCATAGATT---TGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGT 77924 || || | || | || || | ||| || | |||||||| ||| | | Sbjct 1078024 TGTGCCTTGA-CA-ACCTTACGTGCACGTCCT-TCACGCTCATATTGGTGATACAACTCC 1078080 Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 |||||||| | ||||||||| |||| ||||||||| |||| ||||||| | | | Sbjct 1078081 TCAAATTCTTTTCCCCAAACTTCATGCAATCCAGGTGCTTCACTTGGGCAAAAGAGACTC 1078140 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || ||||||| ||||| ||| |||| ||| || | || || ||||| | ||| ||| Sbjct 1078141 CAATCACCATTTTCCTCAACACGTTGCATGAACAAGTCTGGAATCCACAAGGCATAAAAC 1078200 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | ||| || | | || |||||| || || ||||| | ||| | ||| || | Sbjct 1078201 AAATCACGTGCACGATTTTCTTCTTTGCCATGGTTCTTGCGTAAATCCAAAAAGTCAAAG 1078260 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||||| |||||||||||| ||||| || || | | |||||||| || ||||| || Sbjct 1078261 ACATCAGGATGCCATGGTTCAAGATAGATGGCAAATGCACCAGGTCGCTTGTTACCACCT 1078320 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | ||| | || || || || || || | | ||| || | ||| || || || Sbjct 1078321 TGATCCACATAGCGAGCAGTATTGTTGTATACACGTAGCATGGGCACAATGCCATTGGAA 1078380 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATAT---- 78280 ||||| || |||| |||||| ||| ||| ||||| || ||||||| Sbjct 1078381 TAGCCATTGGTACCAGCAATATATGAGCCAGATGCACGAATGTT----GTGGATATTAAG 1078436 Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340 || || || |||||| |||| || || | | |||| || | ||| || ||||| || Sbjct 1078437 ACCAATACCACCTGCCGTCTTTGAAATCTGGGAGCAAATCTTGAGTGTCTCATAGATGCC 1078496 Query 78341 CTCTATACTGTCATCCATCAT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 78399 || || ||| ||| |||| || || ||| ||||| || | ||| || || | Sbjct 1078497 TTCAATGGAGTCTTCCTTCATAGTCAACAAG-AAACATGATGATAATTGTGGACGAGGTG 1078555 Query 78400 TTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT 78459 | || ||||| || | ||| ||| ||||| || || | || || | | |||| Sbjct 1078556 TGCCGGCATTGAAAAGTGTTGGACTGGCATGTGTGAAATAGCGCTCGGACATCAAGTTGT 1078615 Query 78460 ATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACA 78519 | |||||||| || | || ||||| |||||| || || || ||||||||||||| Sbjct 1078616 AAGTTTCAATGGCAGCATCAATGTCTTCACCATGAATACCAACTGCAACACGCATCAACA 1078675 Query 78520 TATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 78579 | || || || | ||| | |||| ||| || || | ||| || || ||||| | Sbjct 1078676 TGTGTTGTGGACGTTCTGCAATCTTGCCATTGATCTTGAGCAAATAGGAACGCTCCAATG 1078735 Query 78580 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639 | || ||||||||| ||||||| || || | || || || || ||||||| ||| Sbjct 1078736 TCTTGAAACCAAAAAAGTTGTAGCCGAAATCACGATCATAGATGATGGCAGAATTGAGTC 1078795 Query 78640 TATCTTTGTATTTGGTAACAATATCCATG-ACAGTAGTTGAAATAATAGGAGATCGTACA 78698 ||| | || | | |||| |||| | | || || || || || || Sbjct 1078796 GATCAGCATTCTTCATGATGATAT-CATGTGTCGCATCAGAGATCATGGGTGAATGTTTG 1078854 Query 78699 CCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGttttttt 78758 | || ||||| |||||| | | || |||| ||| | ||| | ||||| Sbjct 1078855 TTGGTCTTGGGATTGACATAGCTGTGCAGGTCATCCACTACTTGTGAAAAGACCTTTTTG 1078914 Query 78759 GTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGT 78818 ||||| ||||||||||| || | || || | || || |||||||| ||||||||||| Sbjct 1078915 GTTTCTTTGTGTAGATTGGAAATGGCAATACGAGCTGCAAGAATAGCGTAATCAGGATGG 1078974 Query 78819 TGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACC 78878 |||| || | || ||| |||| || || | | |||| ||| | ||| ||||| Sbjct 1078975 CGTGTTGTCATATAAGCAGCTGTTTCAGCAGCAAGGTTGTCTAGCTCCACAGTAGTGACT 1079034 Query 78879 CCATTATATA 78888 || | ||||| Sbjct 1079035 CCTTGATATA 1079044 Score = 224 bits (248), Expect = 1e-53 Identities = 535/801 (67%), Gaps = 11/801 (1%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 || |||| ||||||||| ||||| || ||||| |||| || || || |||||||| Sbjct 1076903 GTGCGTAAATAGTACATGCCAGTCTTAAGACCTTTCTTCCAGCCATAAAAGTGCATGCTA 1076962 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 |||| ||| | | | || || | || ||| |||| ||||| ||||| || Sbjct 1076963 GTCAACTTGCCAAAGTTTGGTTCACCAATGAAAATGTTCAAGCTTTGACTCTGATCAATA 1077022 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 |||| || | ||| || ||||| | || ||||| ||||| || ||||| | ||| Sbjct 1077023 TAAGCGCCACGATCGGCTGCCATATCAATGATGGTACGTTGAGAAAGCTCCCATACAGTC 1077082 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| | | | |||| || | ||| | || | || ||||| || ||| |||| Sbjct 1077083 TTGTAGAGATTCTTGAGCTCCTGTGGGATATTGGGTATACGCTGAATCGAGCCATTATCT 1077142 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAAC--TCTAA 77106 || || || ||||||| | || ||||||||| | | | || | | | || || Sbjct 1077143 GACATGATCATATTCTTGACATTATCATTCCATAGACCCATTTCCACAAGATCCTTCAAA 1077202 Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAAT-ACTCTACGAGTGTAAATATTA 77165 | ||| |||| || ||||| ||||| |||| |||| || | ||||| || | ||| Sbjct 1077203 AGCCATG--GATTGACAATTTGGAATTCACCAG-CAATCACACGTCGAGTATACAAATTG 1077259 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 || || ||||| | |||| ||| || | ||||| | |||||| || || ||| Sbjct 1077260 GATGTGTAAGGTTCAAAGCATTCGTTGAAGCCAAGGATTTGTGAAGTAGATGCTGTAGGC 1077319 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 ||||| |||||||| | ||| | ||||||| || || || | || | | Sbjct 1077320 ATAGGCGCCACCAAGAGTGAATTACGAAGACCATTCTTTGCAATCTTTTGCTTCAATTCA 1077379 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345 |||||||||||||| ||| || ||| |||| ||||| ||||| || ||| || Sbjct 1077380 GCCCAATCCCAAAGATTTGATGGCGTAACTCCCCATAGATCATATTGAAGTTGTCCTTTG 1077439 Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTC 77405 |||| |||||||| |||||| ||||||| || || |||| ||||| ||| Sbjct 1077440 GAAGCAGGTGATCCATCATATGTCTCATAAGTACCATCCACAGCAGCAAGTTCGCAAGAT 1077499 Query 77406 GCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAG-ATCTTGTGCTTC 77464 || |||||||| | | ||| |||||||| || || | | ||||||| ||||| ||||| Sbjct 1077500 GCCTCCAATGCAGCATGATAGATTGTTTCAAAGATTTGCGTATTGAGCTTCTTG-GCTTC 1077558 Query 77465 AATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAAT 77524 ||| || |||||| | | | ||||| ||||| || | || || || |||| Sbjct 1077559 TGGTGAATCGAAAGGATAACGCATCAACATAAAAGCATCCGCCAGACCTTGTACACCAAG 1077618 Query 77525 ACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAAT 77584 |||||| || | ||| | ||| ||| | |||||| | ||||||||| || || Sbjct 1077619 ACCAATGGGACGATGACGGCGATTTGAACGCTCAGCTTCCACGACAGGATAATAGTTGAT 1077678 Query 77585 GTCTATAATTTTATTGAGATT 77605 || || || || |||||||| Sbjct 1077679 ATCAATGATCTTGTTGAGATT 1077699 >seq45 Length=1879501 Score = 156 bits (172), Expect = 6e-33 Identities = 296/433 (68%), Gaps = 2/433 (0%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||| || ||| ||||| || |||||||| || |||||||||| | || || | || Sbjct 1418084 TTGGTAATCAGATACACGCTTTTCGAAAAAGTTGGTTTTGCCTTGAAGAGAGATCATGTC 1418143 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| ||||||||||| ||||| ||| || || | || || | || || Sbjct 1418144 CATAAAGTCAAATGGATTGGTAGCATTGTAATGCTTGTTGAGACCCAAGGCGACAAGCAA 1418203 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| ||||| ||||| || ||| ||| | | |||||| || || || Sbjct 1418204 GCGATCGGCAACAAATTCAATGTATTGACACATGAGCTTGGCATTCATACCAATCAGGGA 1418263 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT-CG 48090 || || ||||| || || | || |||||||| |||| ||||| || || || || | Sbjct 1418264 CACGGGAAGAGCATCAGTCAAGAATTCTTGTTCAATAGCAACAGCTTCAACAATGATACC 1418323 Query 48091 ATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAAT 48150 | | |||| | | |||| | | |||||| ||| | ||||| ||||||| Sbjct 1418324 AAGAATACGTT-CATGGGATGGTTGCTTGCGCAAATGAGAAAAGAGCAAACAAGCAAAAT 1418382 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 || |||||||||||||| | ||| | || || ||| || | || ||||| | Sbjct 1418383 CAGTGTGAAGACCTTCATCACGGGAAATGAGCTCATTGCTAAAAGTCAAGCCTGGCATAA 1418442 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 | |||||||| ||||||||||| || | || ||||| ||||||||||| |||||||||| Sbjct 1418443 GACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTCTA 1418502 Query 48271 CGGCCGCAAATGC 48283 | || ||||| || Sbjct 1418503 CAGCAGCAAAAGC 1418515 >seq2 Length=1153633 Score = 114 bits (126), Expect = 2e-20 Identities = 192/273 (70%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 48014 ATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073 |||||| || || | ||| |||| ||| || || | || ||||| |||||| | || Sbjct 770683 ATTCATACCAATCAAAGAAACAGGTAAAGCATCTGTTAAGAATTCTTGCTCGATATTAAC 770624 Query 48074 AGCATCCACTAT--TATCGATGTTACCGTTTCCTCACTTGGTGGAT-ACAACAAATGTTT 48130 ||| || | || |||| | ||| || | | ||| ||| || | | ||| Sbjct 770623 AGCTTCAATAATGATATCACGGATACG--TTGATGAGATGGCTGATGACGA-AGATGAGA 770567 Query 48131 AAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGA 48190 ||||| | |||||||||||| ||| | |||||||| | ||| | |||||| Sbjct 770566 AAACAAGAGACATGCAAAATCGGTATGTAATCCTTCATCACGTGAAATAAGCTCGTTACT 770507 Query 48191 AAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCC 48250 ||||| ||||| ||||| | |||||| |||||||||||||| || | || ||||| || Sbjct 770506 GAATGTAAGACCTGGCATCAATCCACGCTTTTTGAGCCAAAAGATAGAAGCAAAAGAACC 770447 Query 48251 AGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||||||| |||||||| || || || ||||| Sbjct 770446 AGAAAAGAAGATGCCTTCCACTGCAGCGAATGC 770414 Score = 102 bits (112), Expect = 1e-16 Identities = 215/320 (67%), Gaps = 3/320 (1%) Strand=Plus/Minus Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422 ||||| ||||||| |||||| | | |||||| | ||| || | ||||| || || Sbjct 770272 GTTTCAATAGCATCAAAGAGCATTTCTTTTTCTTGAGGATCCTTGATATAAGTGTCAATC 770213 Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 |||||||| || | || |||||||| |||||||| ||||| ||||| || || || Sbjct 770212 AAAAGACTGTAAGTCTCAGAGTGAATGTTTTCAATCATGATCTGGAATCCATAGAAGCAC 770153 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 | ||||| | || || || || | || || || || | | ||||||||| || || Sbjct 770152 TTGGCTTCAGCAATTTGGACTTCGTTGCAGAAACGCTCTACAAGATTCTCATTGACGATA 770093 Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTGGAA 48599 ||||| | ||||| || || | ||| | ||||| | || || |||| Sbjct 770092 CCATCCGAACTGGCAAAGAAAGCAAGCACACGAGAGATAAAGAAACGTTCATCCTTGGTC 770033 Query 48600 GTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAT 48659 || || | |||||| || || || || | ||| | || || |||||||| || Sbjct 770032 ATCTTGTTCTCCCAGTCGTTTTGGTCCTTGGAAAGATCAATCTCCTCTGCTGTCCAGAAA 769973 Query 48660 GATGCCTCTGCTTTTTTATA 48679 || || ||||||||||| || Sbjct 769972 GAAGCTTCTGCTTTTTTGTA 769953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668157431360