Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq67 127 2e-24 seq34 95.1 1e-14 >seq67 Length=1953875 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| |||| || | || ||||| ||||||||| ||| |||| || Sbjct 1416351 AACATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATTACCTTGGAAGTGGAATCC 1416292 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | | || | || |||||||| ||||| |||||| | || ||| Sbjct 1416291 TCCGACTCCATTGACAATGTCAAACAAAAAATCCAAGATAAGGAAGGTATTCCTCCAGAC 1416232 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | || |||||||| || |||||| |||||||| | ||| | | || ||| Sbjct 1416231 CAACAACGTCTCATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACTCTTTCTGACTAC 1416172 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || ||||| |||||||||||||||||| ||||| Sbjct 1416171 AACATTCAAAAGGAATCTACTCTTCACTTGGTG 1416139 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 ||| |||||||| ||| | ||||| | || ||||| ||||||||| ||| |||| | Sbjct 1481805 AAACATGCAAATTTTCGTTAAAACCCTTACTGGCAAGACCATTACCTTGGAAGTGGAATC 1481746 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | | || | | | || | ||||||||||| || || |||||| | || || Sbjct 1481745 CTCCGACTCCATCGATAATGTGAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCCGA 1481686 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 |||||| | || |||||||| || ||||| |||||||| | ||| | | || || Sbjct 1481685 CCAACAACGTCTCATCTTTGCCGGTAAACAGTTGGAAGATGGCCGCACTCTCTCTGACTA 1481626 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||| || || |||||||||||||||||| ||||| Sbjct 1481625 CAACATCCAAAAGGAATCTACTCTTCACTTGGTG 1481592 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1415892 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1415833 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | || | |||||||| ||| ||||| |||||| | ||| ||||| Sbjct 1415832 GACTCTATCGACAATGTGAAGCAAAAGATTCAAGATAAGGAAGGTATTCCCCCCGATCAG 1415773 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || || ||| |||||||| | ||| | | || ||||| Sbjct 1415772 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1415713 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || || |||||||||||||||||| ||||| Sbjct 1415712 ATCCAAAAGGAATCTACTCTTCACTTGGTG 1415683 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1416120 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1416061 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | || | |||||||| ||| ||||| |||||| | ||| ||||| Sbjct 1416060 GACTCTATCGACAATGTGAAGCAAAAGATTCAAGATAAGGAAGGTATTCCCCCCGATCAG 1416001 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || || ||| |||||||| | ||| | | || ||||| Sbjct 1416000 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1415941 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || || |||||||||||||||||| ||||| Sbjct 1415940 ATCCAAAAGGAATCTACTCTTCACTTGGTG 1415911 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || || ||||| ||||| || ||||| ||| |||| | | Sbjct 1481345 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481286 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | || | || ||||| ||| || || |||||| | || |||||| Sbjct 1481285 GACTCAATTGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAA 1481226 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || |||||||| || || ||| |||||||| | ||| | | |||||||| Sbjct 1481225 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1481166 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || || ||||||||||||||||| ||||| Sbjct 1481165 ATCCAAAAGGAATCTACTCTTCATTTGGTG 1481136 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1481573 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481514 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | || | || ||||| ||| || || |||||| | || ||||| Sbjct 1481513 GACTCTATCGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 1481454 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||| | |||||| | ||| | | || ||||| Sbjct 1481453 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGCCGCACTCTCTCTGACTACAAC 1481394 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||||| |||||||||||||||||| ||||| Sbjct 1481393 ATTCAAAAGGAATCTACTCTTCACTTGGTG 1481364 >seq34 Length=2241197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| || | || |||||||| ||||| ||| |||| || | Sbjct 1642886 ATGCAAATCTTTGTCAAGACCCTTACAGGCAAAACTATTACTTTGGAAGTGGAATCCTCT 1642945 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | | | || ||||| ||| || || |||||| | || ||||| Sbjct 1642946 GACTCTATCGACAACGTCAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAG 1643005 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || |||||||| || || ||| |||||||| || | | ||||||||| Sbjct 1643006 CAACGTCTGATCTTTGCTGGGAAGCAATTGGAAGATGGGCGTACCTTATCTGATTACAAT 1643065 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||||||| || | ||| |||| ||||| ||||||| || Sbjct 1643066 ATTCAAAAGGAATCAACATTACACTTGGTATTACGTCTACGAGGTGG 1643112 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| || | || || | || ||||| |||||||| ||| ||| | Sbjct 1642655 AACATGCAAATTTTTGTTAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTAGAATCT 1642714 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | || | |||||||||||| || || ||||| | ||| ||| Sbjct 1642715 TCTGATTCAATCGATAATGTCAAGCAAAAAATTCAAGACAAGGAAGGAATTCCCCCTGAT 1642774 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| |||| || || || || || ||| | |||||| | |||| | | || ||| Sbjct 1642775 CAACAACGACTGATTTTCGCTGGAAAGCAATTAGAAGATGGAAGAACTTTATCGGACTAC 1642834 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || ||||| ||||||||||| ||||| ||||| Sbjct 1642835 AACATTCAAAAGGAATCTACACTTCATTTGGTG 1642867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335509287570