Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq67 141 8e-29 seq34 107 2e-18 >seq67 Length=1953875 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || | || ||||| ||||||||| ||| |||| || Sbjct 1416351 AACATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATTACCTTGGAAGTGGAATCC 1416292 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || | | | | || |||| |||||||| ||||| |||||| | || ||| Sbjct 1416291 TCCGACTCCATTGACAATGTCAAACAAAAAATCCAAGATAAGGAAGGTATTCCTCCAGAC 1416232 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| | || |||||||| || ||||||||||||||| | ||| | | || ||| Sbjct 1416231 CAACAACGTCTCATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACTCTTTCTGACTAC 1416172 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || |||||||||||||||||||||||| ||||| Sbjct 1416171 AACATTCAAAAGGAATCTACTCTTCACTTGGTG 1416139 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 ||| |||||||| ||| | ||||| | || ||||| ||||||||| ||| |||| | Sbjct 1481805 AAACATGCAAATTTTCGTTAAAACCCTTACTGGCAAGACCATTACCTTGGAAGTGGAATC 1481746 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | | || | | | || | ||||||||||| || || |||||| | || || Sbjct 1481745 CTCCGACTCCATCGATAATGTGAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCCGA 1481686 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 |||||| | || |||||||| || ||||| ||||||||| | ||| | | || || Sbjct 1481685 CCAACAACGTCTCATCTTTGCCGGTAAACAGTTGGAAGATGGCCGCACTCTCTCTGACTA 1481626 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||| || ||||||||||||||||||||| ||||| Sbjct 1481625 CAACATCCAAAAGGAATCTACTCTTCACTTGGTG 1481592 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1415892 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1415833 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | |||||||| ||| ||||| |||||| | ||| ||||| Sbjct 1415832 GACTCTATCGACAATGTGAAGCAAAAGATTCAAGATAAGGAAGGTATTCCCCCCGATCAG 1415773 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || || |||||||||||| | ||| | | || ||||| Sbjct 1415772 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1415713 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||||||||||||| ||||| Sbjct 1415712 ATCCAAAAGGAATCTACTCTTCACTTGGTG 1415683 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1416120 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1416061 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | |||||||| ||| ||||| |||||| | ||| ||||| Sbjct 1416060 GACTCTATCGACAATGTGAAGCAAAAGATTCAAGATAAGGAAGGTATTCCCCCCGATCAG 1416001 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || || |||||||||||| | ||| | | || ||||| Sbjct 1416000 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTCTCTGACTACAAC 1415941 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||||||||||||| ||||| Sbjct 1415940 ATCCAAAAGGAATCTACTCTTCACTTGGTG 1415911 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || ||||| ||||| || ||||| ||| |||| | | Sbjct 1481345 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481286 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | || ||||| ||| || || |||||| | || |||||| Sbjct 1481285 GACTCAATTGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAA 1481226 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| || || |||||||||||| | ||| | | |||||||| Sbjct 1481225 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1481166 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || |||||||||||||||||||| ||||| Sbjct 1481165 ATCCAAAAGGAATCTACTCTTCATTTGGTG 1481136 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1481573 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481514 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | || ||||| ||| || || |||||| | || ||||| Sbjct 1481513 GACTCTATCGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 1481454 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || |||||||| |||||| | ||| | | || ||||| Sbjct 1481453 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGCCGCACTCTCTCTGACTACAAC 1481394 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 |||||||||||||||||||||||| ||||| Sbjct 1481393 ATTCAAAAGGAATCTACTCTTCACTTGGTG 1481364 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || || |||| ||||| || ||||| ||| |||| | | Sbjct 1481117 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACTATTACTCTGGAAGTGGAAAGCTCT 1481058 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | || ||||| ||| || || |||||| | || || ||| Sbjct 1481057 GACTCAATTGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGACCAA 1480998 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| || | |||||||| || || |||||||||||| | ||| || | || ||||| Sbjct 1480997 CAACGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTTTGTCGGACTACAAC 1480938 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 |||||||||||||| || ||||| ||||| Sbjct 1480937 ATTCAAAAGGAATCGACCCTTCATTTGGTG 1480908 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || ||||| ||| |||| | | Sbjct 1415664 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1415605 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | || | || ||||| ||| || || |||||| | || || || Sbjct 1415604 GACTCTATCGACAATGTTAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1415545 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || || || |||||||||||| | ||| || | |||||||| Sbjct 1415544 CAACGTTTGATTTTCGCCGGTAAGCAATTGGAAGATGGCCGTACTTTGTCAGATTACAAC 1415485 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||| ||||| || ||||| Sbjct 1415484 ATCCAAAAGGAATCGACTCTCCATTTGGTG 1415455 >seq34 Length=2241197 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || | || |||||||| ||||| ||| |||| || | Sbjct 1642886 ATGCAAATCTTTGTCAAGACCCTTACAGGCAAAACTATTACTTTGGAAGTGGAATCCTCT 1642945 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || | | | | | |||| ||||| ||| || || |||||| | || ||||| Sbjct 1642946 GACTCTATCGACAACGTCAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAG 1643005 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| || || |||||||||||| || | | ||||||||| Sbjct 1643006 CAACGTCTGATCTTTGCTGGGAAGCAATTGGAAGATGGGCGTACCTTATCTGATTACAAT 1643065 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||| || | ||| |||| ||||| ||||||| || Sbjct 1643066 ATTCAAAAGGAATCAACATTACACTTGGTATTACGTCTACGAGGTGG 1643112 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| || | || || | || ||||| |||||||| ||| ||| | Sbjct 1642655 AACATGCAAATTTTTGTTAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTAGAATCT 1642714 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || | | | || |||||||||||||| || || ||||| | ||| ||| Sbjct 1642715 TCTGATTCAATCGATAATGTCAAGCAAAAAATTCAAGACAAGGAAGGAATTCCCCCTGAT 1642774 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| |||| || || || || || ||||| |||||| | |||| | | || ||| Sbjct 1642775 CAACAACGACTGATTTTCGCTGGAAAGCAATTAGAAGATGGAAGAACTTTATCGGACTAC 1642834 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||||||||| ||||| ||||| Sbjct 1642835 AACATTCAAAAGGAATCTACACTTCATTTGGTG 1642867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796329380916