Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 3e-13 >seq2 Length=1684868 Score = 91.5 bits (100), Expect = 3e-13 Identities = 255/388 (66%), Gaps = 10/388 (3%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| | |||| | || |||| ||||| || |||| || ||||| | ||||| Sbjct 855014 GATTTTGGGTACAACTTTTTTGGATTCAAGACCTTGGAACGCTCCTATCTTTTGAAAATC 855073 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 |||||||| | | ||||| ||| || || | ||||| ||||| | || |||||| Sbjct 855074 AATGGCAAGGTAGCAGAACGTCCTCAACATTTGATTATGCGTGTGGCCATTGGTATTCAC 855133 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 ||| || || || | | || || |||| | ||| ||| | | ||| Sbjct 855134 GGGGAAGATATCGACTCTGCCATTGAAACTTACAACCTTATGTCCGAAAAATTCTTTACA 855193 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC----CGTCAACAATCAGCTGAGCTCGTG 249044 ||||| | || || | ||||| |||||||| |||| ||| || ||| || Sbjct 855194 CATGCAAGCCCTACTTTATTCAATGCCGGTACACCTCGTCCCCAAA----TGTCCTCCTG 855249 Query 249045 CTTTCTT-CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGA 249103 |||||| || ||||| |||| |||||| |||| ||||| ||||| || || ||| | Sbjct 855250 -TTTCTTGCTCACCATGAAAGAAGACTCTATCGAGGGCATCTATGAAACTCTCAAAGTGT 855308 Query 249104 CGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGA 249163 || | || || || || || || || |||||| | || ||| || || || | Sbjct 855309 GTGCCCAAATCTCCAAGACAGCAGGTGGCATTGGTCTCAACATCCACAATATTCGTGCTA 855368 Query 249164 AGGGTTCGTACATCAAAGGTACAAATGG 249191 |||||| ||||| ||||||||||| Sbjct 855369 CGGGTTCTTACATTGCTGGTACAAATGG 855396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765106782592