Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=1266665 Score = 93.3 bits (102), Expect = 4e-14 Identities = 293/454 (65%), Gaps = 0/454 (0%) Strand=Plus/Minus Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||| ||| || | |||||||| ||||| ||||| |||| || || || || Sbjct 715173 TTGATAGTCAGACACACGCTTTTCAAAAAAGTTGGTTTTGCCTTGAAGAGAGATCAGGTC 715114 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| ||||| ||||| | || | | ||| || ||| || | | ||| || Sbjct 715113 CATAAAGTCAAAAGGATTAGAGGAAAGGTAATGTTTGTCTTGACCAAGAGCAACTAGCAA 715054 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 | ||| || | || ||||| ||||| |||| | | ||||||||| || || Sbjct 715053 GCGATCGGCCACAAATTCAATGTATTGGCACATCAGTTTGGCATTCATACCAATCAGAGC 714994 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 || || | || || |||||||||| ||| |||| || || || ||||| Sbjct 714993 CACCGGTAAAGCATCTGTCAAAAATTCTTGTTCGATAGCAACGGCTTCAACGATAATTTC 714934 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 | | | || || | | | ||||| ||| | | || ||||| || Sbjct 714933 CAGGACACGAGAGTTGCTGGGTTGGTGATGAAGATGACCAAACAAAAGGCATGCAAAGTC 714874 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 | ||| || || || || | ||| || ||||| || || ||||| || || |||||||| Sbjct 714873 AGTATGGAGACCTTCGTCACGACTGATCAGTTCATTGGAGAATGTCAACCCAGGCATCAA 714814 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 || ||||| || | ||| || || | || || | ||||||||||| || || || || Sbjct 714813 ACCACGTTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGGAAAAGAAGATGCCTTCCAC 714754 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14368 ||||| || || | | ||||| |||| ||| Sbjct 714753 AGCAGCGAAAGCAACAAGACGTTCAGCAAATGAT 714720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345033243920