Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2 197 1e-45 seq28 123 2e-23 >seq2 Length=1684868 Score = 197 bits (218), Expect = 1e-45 Identities = 1147/1824 (63%), Gaps = 26/1824 (1%) Strand=Plus/Minus Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885 |||| | ||||||||| || || || || ||| |||| || ||||| |||||||| Sbjct 856818 GTTCGGAGATAATACATGCCGGTCTTGAGTCCCTTCTTCCAGCCATAAAAGTGCATACTT 856759 Query 36886 GTCAGTTTTGCGTATGTAGGATTATCTA-TATATATTGTCATTGATTGACTTTGATCTAT 36944 |||| ||| || | || || | | | || | || ||| |||||||||||| || Sbjct 856758 GTCAATTT-GCCAAAGTTGGGTACGCCAATAAAGATGTTCAAGCTTTGACTTTGATCAAT 856700 Query 36945 AAACGCACCTCTGTCGGCTGCCATTTCTA---AAATACATTTTTGAGATATCTCCCAAAC 37001 |||||||||||||| || ||||| || | || ||| | | ||||| ||||| || Sbjct 856699 GAACGCACCTCTGTCTGCCGCCATATCAATCAAAGTACGCTGT---GATATTTCCCAGAC 856643 Query 37002 CGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATT 37058 ||||| || ||| || | | | | || | || | | || ||| | ||| ||| | Sbjct 856642 AGTTTTGTACATTGCCTTGAGGTGAGCCGGGATATTTGGGATATTTTGCACAGAGCCACT 856583 Query 37059 ATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTT--ATTAGTTCT 37116 | ||| || ||||| | || | |||||| || | | | || | || || Sbjct 856582 GTCAGACATGATACGGTTCTTGACATCTTCATTCCAAAT--TCCGAGTTCCACAAGATCC 856525 Query 37117 CTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATA 37176 |||| || |||||| |||| ||||| || || | | || | | |||||| | Sbjct 856524 TTCAAAAGCCATGGATTGACAATTTGAAATTCACCGGCGAGCACACGGCGTGTATACAAG 856465 Query 37177 TTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTA 37236 ||| ||||| ||||||| | | || ||| | | |||||||| || || ||||| Sbjct 856464 TTGGACGTATAGGGTTCAAAGCATTCGTTAAAGCCCAGGATTTGAGACGTTGACGCAGTG 856405 Query 37237 GGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGT 37296 ||||| ||||| | ||||| |||| | || ||| | ||||| | || | Sbjct 856404 GGCATAGGTGCCACAAGAAGAGAGTTTCGTACGCCGTGTTGACTAATTTTAGCCTTCAAA 856345 Query 37297 TCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCT 37356 ||| ||||||||||||| || || || |||||| || ||||| | ||| Sbjct 856344 GCATCCCAATCCCATAAAGACGTAGGCGTCACACCCCACATGTCGTATTGCAATTGACCC 856285 Query 37357 TTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAA 37416 || | ||| | | | ||||| ||||| || |||| | || ||| ||||| || Sbjct 856284 TTGGATACAGGACTACCTTGGTATGTTTCATAGGGACCGTCCACTTGAGCAAGTTCACAG 856225 Query 37417 CTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCT 37476 | ||| | ||||||| || |||||||| || |||||| | || | ||||| ||| Sbjct 856224 GATGCTTCCAACGCGGCATGGTAGATTGTTTCAAAGATTTGTTTGTTCAGCATTTTGGCT 856165 Query 37477 TCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCG 37536 || ||| || || | ||| | || | || || ||||||| | || || ||||| Sbjct 856164 TCATCGGATTCAAAGGGATAACGCATAAGCATGAATGCATCAGCAAGGCCTTGTACACCT 856105 Query 37537 ATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTG 37596 | ||| || || | |||| | || ||||| | ||| ||||| || || || ||| Sbjct 856104 AGACCAATAGGGCGATGTCGCAAGTTCGATCTTTCGGCTTCAATCACAGGGTAGTAGTTG 856045 Query 37597 ATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCG 37656 | ||| || || || || || || || | | | || || | | ||| || | | Sbjct 856044 ACATCGATGATCTTGTTCAGGTTCTTGGCAATCACCTTGGTCACCTTGTGCAATTTTTTG 855985 Query 37657 AA--CATAA-ATACGTTATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACAT 37713 || |||| || | || ||||| | || | |||| | ||||| || Sbjct 855984 AAATCATAGTATTCACGGTTCACCACAAAGGAAGGCAGGGCAATACTGGCAAGATTGCAA 855925 Query 37714 ACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTA 37773 ||||| |||| || | | ||| | ||| || || || || || || || | Sbjct 855924 ACAGCGGCTTCGTCAGGACTGGAATATTCCACAATTTCGGTGCAAAGGTTGCTGCATTTG 855865 Query 37774 ATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATAC 37833 || ||||||| || || |||||||| ||||| | || || |||| || | Sbjct 855864 ATGGTTCCCAGGTTTTGCTGGTTGGATTTGCGGTTACATGCGTCCTTGTATAACATGAAT 855805 Query 37834 GGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACG 37893 || | || ||| ||||||| || | |||| | |||||| || ||||| | Sbjct 855804 GGATTGCCGGTTTCCGTTTGAGCTTCCAAGATAGCATACCATAACTTTTGAGCTTT---G 855748 Query 37894 ATCGCTTTA--AtttttttCTTTGT-TTCGTATTCTATATATAATTTGTTAAAATCATTC 37950 || | || | | ||| | ||| || | | ||| | | || |||| Sbjct 855747 ATGGTTTCACGAGCACGACCTTCGCGTTCATACTTTTCATAGAGAGCTTCGAATTCATCA 855688 Query 37951 CCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCT 38010 ||||| || || ||| || || || | ||| || | | |||||||| | | Sbjct 855687 CCCCAGACCTCATGTAAACCAGGCGCCTCACTTGGGCAAAACATGGACCATTCGCCGTTG 855628 Query 38011 TTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTT 38070 ||| || |||| |||||| | ||| || | ||| | ||| ||| | ||| | Sbjct 855627 GCTTCAACACGTTTCATAAAGAGATCGGGAATCCACAGAGCATAAAAGAGATCACGAGCA 855568 Query 38071 CTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGC 38130 | ||| || || || |||||||| | | | ||| || || |||| ||| Sbjct 855567 CGGATTTCGTCCTTGCCAACATTCTTGCGGAGATCCAAAAAGGTAAAGATGTCAGGATGC 855508 Query 38131 CATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATAT 38190 || ||||| | ||| || | | || || || | ||| | ||| || || | | ||| Sbjct 855507 CAAGGTTCAAGATACATGGCAAAGGCACCAGGACGTTTGTTACCACCTTGGTCGACATAA 855448 Query 38191 CTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATA 38250 | ||||||| || | | | | |||||| | |||||||| || | ||| ||| || Sbjct 855447 CGGGCTGTGTTGTTGAAAACACGCAGCATAGGAAGAATACCATTGGAATAGCCATTTGTA 855388 Query 38251 CCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCA 38310 || | || |||| |||| |||| || ||||| || | || || |||||||| Sbjct 855387 CCAGCAATGTAAGAACCCGTAGCACGAATATTGTGGATGTTGAGACCAATGCCACCTGC- 855329 Query 38311 TGTTTTG-ATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369 ||| ||| | ||| || || ||| | || ||| | || || || ||| ||| || Sbjct 855328 TGTCTTGGAGATTTGGGCACACACTTTGAGAGTTTCATAGATGCCCTCGATAGAGTCTTC 855269 Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429 || || | || | ||||| |||||||| || || || ||||| || ||||| Sbjct 855268 TTTCATGGTGAGCAAGAAACAGGAGGACATTTGGGGACGAGGTGTACCGGCATTGAATAA 855209 Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489 ||||| ||||||| | || ||||||| |||| | || || ||||| || || Sbjct 855208 AGTAGGGCTTGCATGTGTAAAGAATTTTTCGGACATAAGGTTGTAAGTTTCAATGGCAGA 855149 Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || ||||| | ||||||||||| | | || | ||| | || |||||| || | ||| Sbjct 855148 GTCGATATCTTCCCCGTGAATACCAATGGCCACACGCATAATCAAATGTTGAGGACGTTC 855089 Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 | || || ||| ||| | ||||| || ||| || || || | ||||||| | Sbjct 855088 TGCTACCTTGCCATTGATTTTCAAAAGATAGGAGCGTTCCAAGGTCTTGAATCCAAAAAA 855029 Query 38610 ACTATATGAATAATCTCTATCGTA 38633 | || | |||| | |||||| Sbjct 855028 GTTGTACCCAAAATCACGATCGTA 855005 >seq28 Length=432467 Score = 123 bits (136), Expect = 2e-23 Identities = 905/1454 (62%), Gaps = 23/1454 (2%) Strand=Plus/Minus Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 ||| |||| ||| ||||| ||||| | | | || || || | ||||||||||| Sbjct 234914 TGTGTATAGGTTGGAGGTATAAGGTTCGAAGCATTCGTTGAAACCCAGAATTTGAGATGT 234855 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCT 37286 ||||| |||||||| ||||| | | | || | || || ||| | | || | Sbjct 234854 CGATGCCGTAGGCATAGGTGCCACCAATAACGAGTTGCGCACACCGTGTTGACTGATCTT 234795 Query 37287 CTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTG 37346 | || | | ||||||||||||| || ||| || ||||||||| ||||| Sbjct 234794 TTCCTTCAATGTTGCCCAATCCCATAAAGATGATGGTGTCACGCCCCACATATCGTATTG 234735 Query 37347 TAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGC 37406 || ||| || | ||| | | ||||| || || | || | || || ||| Sbjct 234734 CAGTTGACCCTTGGAGACAGGACTTCCTTGGTATGTTTCGTAGGTGCCTTCAACTTGAGC 234675 Query 37407 TAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAA 37466 ||||||||| || ||| | ||| |||| || || ||||| ||||||||| || | Sbjct 234674 CAGTTCGCAAGAAGCTTCCAATGCCGCATGGTAGATGGTTTCAAAAATTTGTTGGTTGAG 234615 Query 37467 TATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACC 37526 | | || ||||| ||| || || | ||||| || | ||||| ||||||| | ||| Sbjct 234614 TTTCTTGGCTTCATCGGATTCAAAGGGATAGCGCATCAGCATAAATGCATCAGCAAGACC 234555 Query 37527 CTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGG 37586 || ||||| | ||| || || | |||| || || |||| | ||| | ||| || Sbjct 234554 TTGCACACCAAGACCAATAGGGCGATGTCGTTTGTTGGATCGTTCAGCTTCCACCACAGG 234495 Query 37587 ATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCT 37646 ||| ||||||||||| || || || || | |||||| | | || | | | | Sbjct 234494 ATAGTAATTGATATCAATGATCTTGTTCAAATTTTTGGTGATCACCTTGGCGACTTTGTG 234435 Query 37647 CAACTTGTCGAA--CATA-AATACGTTATTATTAACAAATTTACTCAACGAAATAGATCC 37703 || || | ||| |||| || | || ||||| | || | ||| | Sbjct 234434 CAGTTTCTTGAAATCATAGGATTCACGGTTCACGACAAACGAAGGTAAGGCGATACTGGC 234375 Query 37704 TAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATT 37763 || ||||| ||||| |||||||| | || ||| | || |||||||| ||||| Sbjct 234374 AAGGTTACACACAGCGACTTCATCAGGGCTAGAGTATTCGACGATTTCTGTACAAAGATT 234315 Query 37764 ACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATA 37823 ||| || | || || ||||| || |||||| ||||| || |||| ||| || || Sbjct 234314 ACTGCATTTGATGGTGCCCAAGTTTTGTTGATTTGATTTCCGGTTGCAAGCATCCTTGTA 234255 Query 37824 TAGTATATACGGCGTTCCTTG-TTCTATTTGAGCCTCGATAATAGATTTCCATAA----- 37877 || ||| | || ||||| | ||| ||||||| || | |||| | ||| || Sbjct 234254 GAGCATAAAAGG-GTTCCCAGTTTCCGTTTGAGCTTCCAGGATAGCATACCACAATTTCT 234196 Query 37878 ---ACTTCTTGCTTTAACGATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAA 37934 |||| || ||| ||| ||| | ||| |||||||| | ||| | Sbjct 234195 GCGCCTTCATGGTTTCACG--CGC----ACGGCCTTC--CCGTTCGTATTTTTCATAGAG 234144 Query 37935 TTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAG 37994 | | ||| || | ||||| ||||| | || | ||| | |||||| | | Sbjct 234143 CTGTTCAAATTCGTCTCCCCAAACATCTTGGAGCCCACGCGCTTCACTTGGACAAAACAA 234084 Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054 ||||| || ||| ||| || |||| |||||| | |||||| | ||| | ||| Sbjct 234083 GGACCAGTCGCCATTCGCTTCCACACGTTTCATAAAGAGATCAGGGATCCAGAGGGCATA 234024 Query 38055 AAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTA-AGCTTAGAAAAT 38113 ||| | ||| | | ||| || || || |||||||| | | | | |||| | Sbjct 234023 AAAGAGATCACGAGCACGGATTTCATCCTTGCCAACATTCTTGCGAAGATCCAAGAAGGT 233964 Query 38114 CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCAC 38173 || || || || ||||| ||||| | ||| || | | || || || | ||| | | Sbjct 233963 -AAAGATGTCCGCATGCCAAGGTTCCAAATACATAGCAAAAGCACCAGGGCGTTTGTTGC 233905 Query 38174 CTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCAT 38233 | || |||| | || | | | || || || | | | | |||||| | ||||||| Sbjct 233904 CACCTTGATCCACGTAACGAGCGGTATTGTTGAAGACACGAAGCATAGGAAGAATACCAT 233845 Query 38234 TAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACA 38293 | || | |||||| | || | || |||| || | || || || || || | Sbjct 233844 TGGAGTAGCCGTTGGTTCCCGCGATGTAAGAGCCTGTGGCACGAATGTTGTGGATGTTGA 233785 Query 38294 ATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATAC 38353 || || |||||||| || || ||| || || ||| | || || | |||| Sbjct 233784 GACCAATGCCACCTGCCGTCTTGGAAATTTGGGCACACACTTTGAGAGTTTCGTAGATAC 233725 Query 38354 CTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAG 38413 |||| || ||| || || || | || | ||||| || | ||| || |||| Sbjct 233724 CTTCGATGGAGTCTTCTTTCATGGTGAGCAAGAAACAGGAGGAGAGTTGGGGTCGAGGAG 233665 Query 38414 TTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTAT 38473 | || ||||| ||||| |||||| ||||| |||| | ||||| |||| || | Sbjct 233664 TGCCTGCGTTGAATAAGGTAGGACTAGCATGGGTGAAGTACTTTTCGGACATGAGGTTGT 233605 Query 38474 ATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCA 38533 | ||||| || || || ||||| | || || || || | | || | ||| | || Sbjct 233604 AGGTTTCAATAGCAGAGTCAATATCTTCACCATGGATGCCGACGGCCACACGCATGATCA 233545 Query 38534 TATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATG 38593 |||||| || | ||| | ||| ||| ||| | |||||||| ||| | || Sbjct 233544 AATGTTGAGGACGTTCAGCCACTTTGCCATTGATTTTCAAAAGATACGAGCGTTCCAGTG 233485 Query 38594 TTTTTATTCCAAAA 38607 | || | |||||| Sbjct 233484 TCTTGAACCCAAAA 233471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524249483360