Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 >seq4 Length=1266665 Score = 105 bits (116), Expect = 6e-18 Identities = 224/325 (69%), Gaps = 12/325 (4%) Strand=Plus/Minus Query 13864 ttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG-- 13921 |||||||| || | | | | ||||| || |||| ||||||| |||||| || ||| Sbjct 714563 TTTTTTTTTATGACTTAC-TGGTTTCAATGGCATCAAATAAATTTTCCTTTTCAATAGGG 714505 Query 13922 TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAG 13981 | ||||| || | || ||||| || | ||| || |||| | || |||||||| || Sbjct 714504 TCCTTGATAT--AGGTGTCAATCAGGAGGCTGTAGGTTTCTGCATGGATGTTTTCGATCA 714447 Query 13982 CTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTA-AAATCTT 14040 ||| ||||| |||||||| ||| | ||||| | | || | || || | ||| || Sbjct 714446 TTATTTGAAATCCATAAAAGCATTTGGCTTCGG-CGATCTTGACTTCGTCCATAAAGTTT 714388 Query 14041 TCTGCCAAGTTTTCATTAACAATACCATCACTAGC-TGCAAAAAATGCCAATATGTTTTT 14099 | ||||||||||||| ||||||||||| ||| |||||| || ||||||| | Sbjct 714387 TGCACCAAGTTTTCATTGACAATACCATC-TGAGCTTGCAAAGAAAGCCAATACATGAGA 714329 Query 14100 AATAAAGTA---TTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAG 14156 ||||||||| || || ||| | | |||| ||||||| || || || || Sbjct 714328 AATAAAGTACCGTTCATCGTCAGTCATTTTGTTTTCCCAATCGATGTTGTCTTTCGAGAG 714269 Query 14157 ATCTACTTCATCAACTGTCCAAAAA 14181 ||| | || ||| ||||||| ||| Sbjct 714268 ATCGATCTCTTCAGCTGTCCAGAAA 714244 Score = 98.7 bits (108), Expect = 1e-15 Identities = 294/454 (65%), Gaps = 0/454 (0%) Strand=Plus/Minus Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430 |||||| ||| || | |||||||||||||| ||||| |||| || || || || Sbjct 715173 TTGATAGTCAGACACACGCTTTTCAAAAAAGTTGGTTTTGCCTTGAAGAGAGATCAGGTC 715114 Query 13431 CATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAA 13490 |||||| || || ||||| | || | | ||| || ||| || | | || || Sbjct 715113 CATAAAGTCAAAAGGATTAGAGGAAAGGTAATGTTTGTCTTGACCAAGAGCAACTAGCAA 715054 Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550 | ||| || | ||| ||||| ||||| |||| | | ||||||||| || || Sbjct 715053 GCGATCGGCCACAAATTCAATGTATTGGCACATCAGTTTGGCATTCATACCAATCAGAGC 714994 Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610 || || | || || |||||||||| ||| |||| || || || ||||| Sbjct 714993 CACCGGTAAAGCATCTGTCAAAAATTCTTGTTCGATAGCAACGGCTTCAACGATAATTTC 714934 Query 13611 CTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 13670 | | | || || | | | ||||| ||| | | || ||||| || Sbjct 714933 CAGGACACGAGAGTTGCTGGGTTGGTGATGAAGATGACCAAACAAAAGGCATGCAAAGTC 714874 Query 13671 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 13730 | ||| || || || || | ||| || ||||| || || ||||| || || |||||||| Sbjct 714873 AGTATGGAGACCTTCGTCACGACTGATCAGTTCATTGGAGAATGTCAACCCAGGCATCAA 714814 Query 13731 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 13790 || ||||| || | ||| || || | || || | ||||||||||| || || || || Sbjct 714813 ACCACGTTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGGAAAAGAAGATGCCTTCCAC 714754 Query 13791 TGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 ||||| || || | || ||||| |||| ||| Sbjct 714753 AGCAGCGAAAGCAACAAGACGTTCAGCAAATGAT 714720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588237658160