Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=3895514 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 |||||||| || |||||||| ||||| |||| | |||||||||||| ||| |||||| Sbjct 3274346 ATATAAGTGTCAATCAATAAACTATAAGTTTCAGCATGAATATTTTCAATCATGATTTGG 3274287 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAG 13540 || |||||||| ||| | || || | | || ||||| ||| ||| | ||| Sbjct 3274286 AATCCATAAAAGCATTTGGCTTCAGCGATCTTGACTTCATCCATAAAGTTTTGCACCAAG 3274227 Query 13541 TTTTCGTTAACTATCCCGTCACTAGC-AGCaaaaaaaGC 13578 |||||||| || || || || | ||| |||||| ||||| Sbjct 3274226 TTTTCGTTGACAATACCATC-CGAGCTAGCAAAGAAAGC 3274189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981906255788