Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq67 109 5e-19 seq34 96.9 3e-15 >seq67 Length=1953875 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 || || ||||||||||| ||||| || || || || || ||||||||| | ||| ||| Sbjct 1416354 TTCAACATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATTACCTTGGAAGTGGAA 1416295 Query 115340 TCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGT 115398 ||| |||| | ||| |||| || ||||||||||| ||||| ||||| | || Sbjct 1416294 TCCTCCGACTCCATTG-ACAATGTCAAACAAAAAATCCAAGATAAGGAAGGTATTCCTCC 1416236 Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458 || || ||| | || || | ||| || |||||||| ||||||| | || | | || Sbjct 1416235 AGACCAACAACGTCTCATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACTCTTTCTGA 1416176 Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGTG 115495 || ||||||||||| || |||||| | || ||||| Sbjct 1416175 CTACAACATTCAAAAGGAATCTACTCTTCACTTGGTG 1416139 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || | || || || || ||||| | ||| ||| | Sbjct 1481573 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481514 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| || | | |||| || |||||||| ||| || || ||||| | || |||||| Sbjct 1481513 GACTCTATCG-ACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCA 1481455 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| ||| || |||||||||||||||| | || | | || || || Sbjct 1481454 GCAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGCCGCACTCTCTCTGACTACAA 1481395 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||||| || |||||| | || ||||| Sbjct 1481394 CATTCAAAAGGAATCTACTCTTCACTTGGTG 1481364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| ||||||||||| || ||||| || || || || ||||||||| | ||| ||| || Sbjct 1481805 AAACATGCAAATTTTCGTTAAAACCCTTACTGGCAAGACCATTACCTTGGAAGTGGAATC 1481746 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | |||| | | | | || || |||||||| || || ||||| | || || Sbjct 1481745 CTCCGACTCCATCGATAATGTGAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCCGA 1481686 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || ||| | || || | ||| || ||||| || ||||||| | || | | || || Sbjct 1481685 CCAACAACGTCTCATCTTTGCCGGTAAACAGTTGGAAGATGGCCGCACTCTCTCTGACTA 1481626 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| ||||| || |||||| | || ||||| Sbjct 1481625 CAACATCCAAAAGGAATCTACTCTTCACTTGGTG 1481592 >seq34 Length=2241197 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || |||||||||||||| || || || || || || |||||||| | ||| || || Sbjct 1642655 AACATGCAAATTTTTGTTAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTAGAATCT 1642714 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || | | | | || || ||||||||| || || ||||| | ||| |||| Sbjct 1642715 TCTGATTCAATCGATAATGTCAAGCAAAAAATTCAAGACAAGGAAGGAATTCCCCCTGAT 1642774 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||| |||| |||| || || || ||||||||||||| | ||| | | || || Sbjct 1642775 CAACAACGACTGATTTTCGCTGGAAAGCAATTAGAAGATGGAAGAACTTTATCGGACTAC 1642834 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||||||| || ||||| | ||| ||||| Sbjct 1642835 AACATTCAAAAGGAATCTACACTTCATTTGGTG 1642867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343512715280