Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq67 116 3e-21 seq34 102 6e-17 >seq67 Length=1953875 Score = 116 bits (128), Expect = 3e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 21822 TAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAA 21881 || || | ||| |||||||| || | || || | || ||||| ||||||||| ||||| Sbjct 1416360 TATTACTTCAACATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATTACCTTGGAA 1416301 Query 21882 ACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTA 21941 |||| || | || | | | | || | || |||||||| ||||| || ||| | Sbjct 1416300 GTGGAATCCTCCGACTCCATTGACAATGTCAAACAAAAAATCCAAGATAAGGAAGGTATT 1416241 Query 21942 CCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATG 22001 ||| | ||||||| | || ||||||||||| |||||| | |||||| ||| | Sbjct 1416240 CCTCCAGACCAACAACGTCTCATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACTCTT 1416181 Query 22002 GCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | || ||||| ||||| ||||||||||||||||| |||| | ||| | || || || Sbjct 1416180 TCTGACTACAACATTCAAAAGGAATCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 1416122 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || |||||||| || ||||||| | || ||||| ||||||||| ||||| |||| || Sbjct 1481804 AACATGCAAATTTTCGTTAAAACCCTTACTGGCAAGACCATTACCTTGGAAGTGGAATCC 1481745 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || | | | || | ||||||||||| || || || ||| | ||| || Sbjct 1481744 TCCGACTCCATCGATAATGTGAAGCAAAAAATCCAAGACAAGGAAGGTATTCCTCCCGAC 1481685 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| | || |||||||| || ||||| | |||||| ||| | | || ||| Sbjct 1481684 CAACAACGTCTCATCTTTGCCGGTAAACAGTTGGAAGATGGCCGCACTCTCTCTGACTAC 1481625 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||||||||||||||| |||| | ||| | || || || Sbjct 1481624 AACATCCAAAAGGAATCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 1481575 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || ||||| || ||||| ||||| |||| | | Sbjct 1481345 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481286 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | || | || ||||| ||| || || || ||| | ||| | ||| Sbjct 1481285 GACTCAATTGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAA 1481226 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||||||||| || ||| | |||||| ||| | | |||||||| Sbjct 1481225 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1481166 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||||||||| |||| | ||| | || || || Sbjct 1481165 ATCCAAAAGGAATCTACTCTTCATTTGGTGCTCCGTCTCCGTGGTGG 1481119 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || ||||| || ||||| ||||| |||| | | Sbjct 1481117 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACTATTACTCTGGAAGTGGAAAGCTCT 1481058 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | || | || ||||| ||| || || || ||| | ||| ||||| Sbjct 1481057 GACTCAATTGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGACCAA 1480998 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || | ||||||||||| || ||| | |||||| ||| || | || ||||| Sbjct 1480997 CAACGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTTTGTCGGACTACAAC 1480938 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| || |||||| |||| | ||| | || || || Sbjct 1480937 ATTCAAAAGGAATCGACCCTTCATTTGGTGCTTCGTCTTCGTGGTGG 1480891 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || ||||| || ||||| ||||| |||| | | Sbjct 1481573 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481514 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | || | || ||||| ||| || || || ||| | ||| | || Sbjct 1481513 GACTCTATCGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 1481454 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || |||||||| |||||| |||||||| ||| | | || ||||| Sbjct 1481453 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGCCGCACTCTCTCTGACTACAAC 1481394 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||||||||||||||| |||| | ||| | || || || Sbjct 1481393 ATTCAAAAGGAATCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 1481347 >seq34 Length=2241197 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| ||| |||| || | || ||||| |||||||| ||||| ||| | Sbjct 1642654 CAACATGCAAATTTTTGTTAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTAGAATC 1642713 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || | | | || | |||||||||||| || || || || | || | Sbjct 1642714 TTCTGATTCAATCGATAATGTCAAGCAAAAAATTCAAGACAAGGAAGGAATTCCCCCTGA 1642773 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||| |||| || || ||||| || ||| |||||||| || |||| | | || || Sbjct 1642774 TCAACAACGACTGATTTTCGCTGGAAAGCAATTAGAAGATGGAAGAACTTTATCGGACTA 1642833 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||| ||||||||||| |||||| |||| | ||| | || || || Sbjct 1642834 CAACATTCAAAAGGAATCTACACTTCATTTGGTGCTTCGTCTTCGTGGTGG 1642884 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || |||||||| ||||| ||||| |||| || | Sbjct 1642886 ATGCAAATCTTTGTCAAGACCCTTACAGGCAAAACTATTACTTTGGAAGTGGAATCCTCT 1642945 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | | | || ||||| ||| || || || ||| | ||| | || Sbjct 1642946 GACTCTATCGACAACGTCAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGATCAG 1643005 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||||||||| || ||| | |||||| || | | ||||||||| Sbjct 1643006 CAACGTCTGATCTTTGCTGGGAAGCAATTGGAAGATGGGCGTACCTTATCTGATTACAAT 1643065 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||| || | || ||||||||||| ||||||| || Sbjct 1643066 ATTCAAAAGGAATCAACATTACACTTGGTATTACGTCTACGAGGTGG 1643112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124389723276