Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq34 131 1e-25 seq67 116 3e-21 >seq34 Length=2241197 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| ||||| || ||||| |||||||| || | | |||| | |||||| Sbjct 1642866 ACCAAATGAAGTGTAGATTCCTTTTGAATGTTGTAGTCCGATAAAGTTCTTCCATCTTCT 1642807 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || |||||| | |||| || ||||| || ||||||||||||||||| | Sbjct 1642806 AATTGCTTTCCAGCGAAAATCAGTCGTTGTTGATCAGGGGGAATTCCTTCCTTGTCTTGA 1642747 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| | || || | ||| | |||||| || | |||||||| || Sbjct 1642746 ATTTTTTGCTTGACATTATCGATTGAATCAGAAGATTCTACTTCCAGAGTAATGGTCTTG 1642687 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || ||||| || |||||||||||||| || Sbjct 1642686 CCGGTAAGAGTCTTAACAAAAATTTGCATGTT 1642655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 |||||||| | | ||| || || || | || || || ||||| || |||||||| | | Sbjct 1643112 CCACCTCGTAGACGTAATACCAAGTGTAATGTTGATTCCTTTTGAATATTGTAATCAGAT 1643053 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | | ||||| ||||| || ||||| | |||| ||| || || ||| || Sbjct 1643052 AAGG-TACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAGACGTTGCTGATCGGGAGG 1642994 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| || ||| || | || |||| || ||| || Sbjct 1642993 GATACCTTCCTTGTCTTGAATCTTTTGTTTGACGTTGTCGATAGAGTCAGAGGATTCCAC 1642934 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| ||||| ||||| || || || ||||| ||||||||| Sbjct 1642933 TTCCAAAGTAATAGTTTTGCCTGTAAGGGTCTTGACAAAGATTTGCATA 1642885 >seq67 Length=1953875 Score = 116 bits (128), Expect = 3e-21 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || ||||| |||||||| || |||| | | | ||||| Sbjct 1481593 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 1481652 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || ||||| || || | || | ||| ||||||||| ||||| ||||||||||| Sbjct 1481653 AACTGTTTACCGGCAAAGATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCTTGG 1481712 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| | || || | ||| ||| || || ||||||||||| || Sbjct 1481713 ATTTTTTGCTTCACATTATCGATGGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 1481772 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTT--GAAATAAA 15188 || || || ||||| || ||||||||||| ||| |||||||| Sbjct 1481773 CCAGTAAGGGTTTTAACGAAAATTTGCATGTTTGAGAAATAAA 1481815 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || ||||| |||||||| || |||| | | | |||||| Sbjct 1481365 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCT 1481424 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| ||||| | |||||||| || || || ||||| ||||||||||| | Sbjct 1481425 AATTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 1481484 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || |||| || |||| || || || ||||| || || Sbjct 1481485 ATCTTTTGTTTCACATTGTCGATAGAGTCAGAGCTTTCCACTTCCAATGTAATAGTCTTG 1481544 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || ||||| ||||||||| Sbjct 1481545 CCAGTCAAGGTCTTGACAAAGATTTGCATA 1481574 Score = 109 bits (120), Expect = 4e-19 Identities = 157/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| ||||| || ||||| |||||||| || ||| | | | ||||| Sbjct 1416140 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGGCCATCTTCC 1416199 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| ||||| | || | ||| |||||||| ||||| |||||||| || Sbjct 1416200 AATTGTTTACCAGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGG 1416259 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| ||| | || || | ||| ||| || || ||||||||||| || Sbjct 1416260 ATTTTTTGTTTGACATTGTCAATGGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 1416319 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAA 15187 || || ||||| || || ||||||||||| ||||| ||| Sbjct 1416320 CCAGTAAGAGTCTTGACGAAAATTTGCAT-GTTGAAGTAA 1416358 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||||||||| || || ||||| |||||||| || | | | | | ||||| Sbjct 1480909 ACCAAATGAAGGGTCGATTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCATCTTCC 1480968 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || ||||| | ||||| || ||||||||| || || ||||||||||| | Sbjct 1480969 AATTGCTTACCAGCAAAGATCAATCGTTGTTGGTCGGGAGGGATACCTTCCTTGTCTTGA 1481028 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || || | || |||| || || | ||||| || || Sbjct 1481029 ATCTTTTGTTTCACATTGTCAATTGAGTCAGAGCTTTCCACTTCCAGAGTAATAGTCTTG 1481088 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||||||| || ||||| ||||||||| Sbjct 1481089 CCAGTCAGAGTCTTCACAAAGATTTGCATA 1481118 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| ||||| || ||||| ||||||||||| ||| | | | ||||| Sbjct 1481137 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1481196 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || ||||| | || | ||| ||||| ||| || || ||||||||||| | Sbjct 1481197 AATTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATACCTTCCTTGTCTTGA 1481256 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || || | || |||| || || || ||||| || || Sbjct 1481257 ATCTTTTGTTTCACATTGTCAATTGAGTCAGAGCTTTCCACTTCCAATGTAATAGTCTTG 1481316 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || ||||| ||||||||| Sbjct 1481317 CCAGTCAAGGTCTTCACAAAGATTTGCATA 1481346 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || ||||| || || || || ||||| ||||||||||| ||| || || | |||| Sbjct 1415456 ACCAAATGGAGAGTCGATTCCTTTTGGATGTTGTAATC--TGACAAAGTACGGCCATCTT 1415513 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | ||||| || || ||| | |||||||| || ||||| ||||| ||||||||||| Sbjct 1415514 CCAATTGCTTACCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTT 1415573 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| || ||| ||| | || |||| || ||| || || | ||||| || | Sbjct 1415574 GAATCTTTTGTTTAACATTGTCGATAGAGTCAGATGATTCCACTTCCAGAGTAATAGTCT 1415633 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || |||| ||| || ||||| ||||||||| Sbjct 1415634 TGCCAGTCAAAGTCTTGACAAAGATTTGCATA 1415665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391590562790