Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq34 102 8e-17 >seq34 Length=2241197 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || || ||||| |||| || || || ||||||||||||||||| Sbjct 1643112 CCACCTCGTAGACGTAATACCAAGTGTAATGTTGATTCCTTTTGAATATTGTAATCAGAT 1643053 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | || || ||||| |||||| || |||||||||||||| Sbjct 1643052 AAGGTACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAGACGTTGCTGATCGGGAGGG 1642993 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || || |||| |||| |||| | ||| | || || Sbjct 1642992 ATACCTTCCTTGTCTTGAATCTTTTGTTTGACGTTG-TCGATAGAGTCAGAGGATTCCAC 1642934 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||||| || || || || ||||| || ||||| Sbjct 1642933 TTCCAAAGTAATAGTTTTGCCTGTAAGGGTCTTGACAAAGATTTGCAT 1642886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500241286560