Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq28 141 1e-28 seq2 87.8 3e-12 >seq28 Length=432467 Score = 141 bits (156), Expect = 1e-28 Identities = 331/493 (67%), Gaps = 6/493 (1%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || ||||||| || || | || ||||| | | | | || |||||||| |||||| Sbjct 235294 TCGACGGTGAACTTGATAGCATCGACCGCAGGACGGGTGCGGAGGTAGTACATACCGGTC 235235 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||||| ||| || || | ||||||| || | ||| | | ||||||| || Sbjct 235234 TTGAGCCCCTTCTTCCAGCCATAAAAGTGCATGCTAGTTAATTTACCAAAGTTGGGGACG 235175 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 | ||| ||||| ||| || |||||||||||||||| | || || ||||||||| Sbjct 235174 CCGATGAAGATGTTGAGACTTTGACTTTGGTCGATGAAAGCACCACGGTCGGCGGCCATA 235115 Query 204023 TTGAT-AATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTG 204081 | || |||| | | ||||| || ||||| || |||||| ||| | || || ||| Sbjct 235114 TCAATCAATGTACGT-TGCGAGATTTCCCAGACGGTCTTGTACATGGCTTTGAGATGTGC 235056 Query 204082 AGGCACATCTTC-CCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 ||| ||| | | | | ||| | |||||| | || | ||| | | || | | Sbjct 235055 AGG--GATCGACGCAATATTCTGTACCGAGCCACTATCAGACATGATGCGGTTCTTGATA 234998 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 || || ||||| |||| | || ||| || ||| ||||||| ||| || Sbjct 234997 TCTTCATTCCACACACCCAGTTCCACAAGATCCTTCAGCAGCCATGGGTTGACGATTTGG 234938 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| ||||| | || ||| | |||||| ||| | |||||||| ||| Sbjct 234937 AATTCACCGGCAAGCACACGACGTGTGTATAGGTTGGAGGTATAAGGTTCGAAGCATTCG 234878 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| || | ||| |||| || ||||| ||||| || |||| | | |||||| Sbjct 234877 TTGAAACCCAGAATTTGAGATGTCGATGCCGTAGGCATAGGTGCCACCAATAACGAGTTG 234818 Query 204320 CGCACACCGTATT 204332 |||||||||| || Sbjct 234817 CGCACACCGTGTT 234805 >seq2 Length=1684868 Score = 87.8 bits (96), Expect = 3e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || || |||| || || | ||| ||||| | | ||| ||||| |||||||||||| Sbjct 856854 TCAACGGTAAACTTGATAGCATCCACAGCAGGTCGGGTTCGGAGATAATACATGCCGGTC 856795 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||||| ||| || || | |||||| | || ||||| | |||||| || Sbjct 856794 TTGAGTCCCTTCTTCCAGCCATAAAAGTGCATACTTGTCAATTTGCCAAAGTTGGGTACG 856735 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022 | || ||||||| || ||||| || ||||| | | | ||||| |||||| Sbjct 856734 CCAATAAAGATGTTCAAGCTTTGACTTTGATCAATGAACGCACCTCTGTCTGCCGCCATA 856675 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 | || | || ||| || || ||||| || || ||| ||| Sbjct 856674 TCAATCAAAGTACGCTGTGATATTTCCCAGACAGTTTTGTACA 856632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154265692640