Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq34 113 3e-20 >seq34 Length=2241197 Score = 113 bits (124), Expect = 3e-20 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 39487 TCATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAA 39546 || || || ||||| | ||| | |||||| || || || ||| ||||| ||||| ||| Sbjct 1643118 TCGTCACCACCTCGTAGACGTAATACCAAGTGTAATGTTGATTCCTTTTGAATATTGTAA 1643059 Query 39547 TCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCC 39606 || | || || |||| |||||||| ||||| |||| || | ||| |||||||| Sbjct 1643058 TCAGATAAGGTACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAGACGTTGCTGATCG 1642999 Query 39607 GAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGC 39664 | || | ||||| ||||| || |||||||| | | |||| || | ||| | | Sbjct 1642998 GGAGGGATACCTTCCTTGTCTTGAATCTTTTGTTTGACGTTGTCGATA--GAGTCAGAGG 1642941 Query 39665 TTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||| ||||||||||| ||||| || || | || || || ||||| ||||| Sbjct 1642940 ATTCCACTTCCAAAGTAATAGTTTTGCCTGTAAGGGTCTTGACAAAGATTTGCAT 1642886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369202044702