Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq45 96.9 4e-15 >seq45 Length=2104571 Score = 96.9 bits (106), Expect = 4e-15 Identities = 184/271 (68%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805 ||||||||| | |||| | ||| | || ||| ||||| | || | ||| |||||||| Sbjct 1901952 TGATATTGCCTTGGGTAACAGTCAACGTTTCGGTGTTCCTCTCGGTTTTGGTGGTCCTCA 1901893 Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 |||||| ||||| || | || | ||||| | || ||||| | |||||||| Sbjct 1901892 TGCTGCCTTCTTCGCCTGTAAGGAAGAACATAAGCGTCGTATTCCTGGTCGCATTGTAGG 1901833 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | || ||| | | ||||| || ||| | | || || || ||| | || || Sbjct 1901832 TGTCTCTCGTGATGCTCATGGTAAATCTGCTTACCGTCTTGCTCTTCAAACTCGTGAACA 1901773 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 |||||| | | || || || || ||||||||||| || ||||| || || |||| || Sbjct 1901772 ACATATCCGTCGTGAAAAGGCCACTAGTAACATCTGTACCGCTCAAGCCCTTTTGGCCAA 1901713 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGT 154016 |||||||| | ||||| | || |||||| Sbjct 1901712 TATGTCTGCTATGTATGCTGTTTACCATGGT 1901682 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 ||||||||||||||| |||| || | || || | || ||| | || || ||||||||| Sbjct 1902529 TACACTCCCTATCAACCTGAAATTGCGCAAGGTCGTTTAGAATCCTTGTTGAATTACCAA 1902470 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | ||| || | || || ||||||| || || || ||||| || ||||||| Sbjct 1902469 ACCATGGTCAGTGATTTGACTGGTCTACCAATTGCCAATGCCTCTCTTTTGGATGAAGGT 1902410 Query 153408 ACTGCAGCAGCAGAAGCAATGCT 153430 ||||| || || ||||||||||| Sbjct 1902409 ACTGCTGCTGCTGAAGCAATGCT 1902387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212119424960