Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq45 93.3 5e-14 >seq45 Length=2104571 Score = 93.3 bits (102), Expect = 5e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 157963 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 158022 ||||||||||||||| |||| || | || || | || ||| | || || ||||||||| Sbjct 1902529 TACACTCCCTATCAACCTGAAATTGCGCAAGGTCGTTTAGAATCCTTGTTGAATTACCAA 1902470 Query 158023 ACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCA 158082 || | ||| || | || || ||||| || || || || ||||| || ||||||| Sbjct 1902469 ACCATGGTCAGTGATTTGACTGGTCTACCAATTGCCAATGCCTCTCTTTTGGATGAAGGT 1902410 Query 158083 ACTGCAGCAGCAGAAGCAATGCTG 158106 ||||| || || |||||||||||| Sbjct 1902409 ACTGCTGCTGCTGAAGCAATGCTG 1902386 Score = 84.2 bits (92), Expect = 3e-11 Identities = 181/271 (67%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||| ||||| | |||| | ||| | || ||| ||||| | || | || |||||||| Sbjct 1901952 TGATATTGCCTTGGGTAACAGTCAACGTTTCGGTGTTCCTCTCGGTTTTGGTGGTCCTCA 1901893 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 |||||| ||||| || | || | ||||| | || ||||| | |||||||| Sbjct 1901892 TGCTGCCTTCTTCGCCTGTAAGGAAGAACATAAGCGTCGTATTCCTGGTCGCATTGTAGG 1901833 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | || ||| | ||||| || ||| | | || || || ||| | || || Sbjct 1901832 TGTCTCTCGTGATGCTCATGGTAAATCTGCTTACCGTCTTGCTCTTCAAACTCGTGAACA 1901773 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 |||||| | | || || || || ||||||||||| || || ||||| || |||| || Sbjct 1901772 ACATATCCGTCGTGAAAAGGCCACTAGTAACATCTGTACCGCTCAAGCCCTTTTGGCCAA 1901713 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGT 158691 |||||||| | ||||| | || |||||| Sbjct 1901712 TATGTCTGCTATGTATGCTGTTTACCATGGT 1901682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050509039840