Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq28 273 2e-68 seq2 273 2e-68 seq1 129 7e-25 seq17 84.2 2e-11 >seq28 Length=432467 Score = 273 bits (302), Expect = 2e-68 Identities = 808/1249 (65%), Gaps = 19/1249 (2%) Strand=Plus/Minus Query 47565 TATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAA 47624 ||||||| || | || | | || ||| ||||| ||| ||||||||||| || Sbjct 234703 TATGTTTCGTAGGTGCCTTCAACTTGAGCCAGTTCGCAAGAAGCTTCCAATGCCGCATGG 234644 Query 47625 TATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATAN 47684 || || |||||||| |||| | ||| || ||| | ||||| |||||||| ||||| Sbjct 234643 TAGATGGTTTCAAAAATTTGTTGGTTGAGTTTCTTGGCTTCATCGGATTCAAAGGGATAG 234584 Query 47685 NNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTT 47744 |||| ||| || | ||||| ||||||| |||||| || | ||| | Sbjct 234583 CGCATCAGCATAAATGCATCAGCAAGACCTTGCACACCAAGACCAATAGGGCGATGTCGT 234524 Query 47745 TTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGA 47804 || || || |||||||| | ||||| | || ||||| || || || || | | Sbjct 234523 TTGTTGGATCGTTCAGCTTCCACCACAGGATAGTAATTGATATCAATGATCTTGTTCAAA 234464 Query 47805 NNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTA---TTT 47861 | | || | ||| || |||||| | | | || Sbjct 234463 TTTTTGGTGATCACCTTGGCGACTTTGTGCAGTTTCTTGAAATCATAGGATTCACGGTTC 234404 Query 47862 ATAACAAACCTAT-TAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATT 47920 | |||||| | |||| || ||| || || ||||| ||||| || |||| || | Sbjct 234403 ACGACAAACGAAGGTAAG-GCGATACTGGCAAGGTTACACACAGCGACTTCATCAGGGCT 234345 Query 47921 AGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATG 47980 || |||| | ||||| | ||| ||||||| |||||||| || ||||| ||||| || Sbjct 234344 AGAGTATTCGACGATTTCTGTACAAAGATTACTGCATTTGATGGTGCCCAAGTTTTGTTG 234285 Query 47981 ATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATC 48038 ||| ||| ||| || || |||||||| ||||||||||| | |||||||| | Sbjct 234284 ATTTGATTTCCG--GTTGCAAGCATCCTTGTAGAGCATAAAAGGGTTCCCAGTTTCCGTT 234227 Query 48039 TGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTA 48098 |||| ||| | ||||| | ||| | || ||||| || | | || Sbjct 234226 TGAGCTTCCAGGATAGCATACCACAATTTCTGCGCCTTCATGGTTTCACGCGCACGGCCT 234167 Query 48099 TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCA 48158 || |||||||||| ||| | || |||||||| || || | |||| | | |||| Sbjct 234166 TCCCGTTCGTATTTTTCATAGAGCTGTTCAAATTCGTCTCCCCAAACATCTTGGAGCCCA 234107 Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218 | |||| | ||||| | ||| ||||| || ||| || || | ||||||| Sbjct 234106 CGCGCTTCACTTGGACAAAACAAGGACCAGTCGCCATTCGCTTCCACACGTTTCATAAAG 234047 Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278 | ||| || ||||| || || ||| | ||| | || | | ||| || |||||| | Sbjct 234046 AGATCAGGGATCCAGAGGGCATAAAAGAGATCACGAGCACGGATTTCATCCTTGCCAACA 233987 Query 48279 TTCCTTTTAAGTTC-AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 ||| | ||| || ||||| || | || || |||||||| ||||| ||||| || || Sbjct 233986 TTCTTGCGAAGATCCAAGAAGGTAAAG-ATGTCCGCATGCCAAGGTTCCAAATACATAGC 233928 Query 48338 CATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAAC 48397 | |||| || ||||| || || |||||||| | || | || |||||||| | || Sbjct 233927 AAAAGCACCAGGGCGTTTGTTGCCACCTTGATCCACGTAACGAGCGGTATTGTTGAAGAC 233868 Query 48398 TCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACT 48457 | | ||| || | ||||||||| || || |||||||||| || ||| || | Sbjct 233867 ACGAAGCATAGGAAGAATACCATTGGAGTAGCCGTTGGTTCCCGCGATGTAAGAGCCTGT 233808 Query 48458 AGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACA 48517 || | || || || | ||| || ||||||||| | || || ||| | ||||| Sbjct 233807 GGCACGAATGTTGTGGATGTTGAGACCAATGCCACCTGCCGTCTTGGAAATTTGGGCACA 233748 Query 48518 CCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACA 48577 | ||| || || || || || ||||| || || ||| |||| | | | ||||| Sbjct 233747 CACTTTGAGAGTTTCGTAGATACCTTCGATGGAGTCTTCTTTCATGGTGAGCAAGAAACA 233688 Query 48578 ACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAA 48637 || | ||| || || ||| |||| || ||||| || ||| ||||| | || Sbjct 233687 GGAGGAGAGTTGGGGTCGAGGAGTGCCTGCGTTGAATAAGGTAGGACTAGCATGGGTGAA 233628 Query 48638 CCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC----CCATTGAT 48693 | || || || | | || || ||||||||| |||| || ||||| |||| ||| Sbjct 233627 GTACTTTTCGGACATGAGGTTGTAGGTTTCAATAGCAGAGTCAATATCTTCACCATGGAT 233568 Query 48694 GTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTA 48753 | || | | |||||||| | || || |||||| | |||| | | |||| ||| | Sbjct 233567 G----CCGACGGCCACACGCATGATCAAATGTTGAGGACGTTCAGCCACTTTGCCATTGA 233512 Query 48754 TTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||||||||||||| || ||||| ||| || || |||||| ||||||| Sbjct 233511 TTTTCAAAAGATACGAGCGTTCCAGTGTCTTGAACCCAAAAAAGTTGTA 233463 >seq2 Length=1684868 Score = 273 bits (302), Expect = 2e-68 Identities = 1151/1813 (63%), Gaps = 40/1813 (2%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 ||||| | ||||||||| || ||||| | || |||| ||||| || |||||||| Sbjct 856818 GTTCGGAGATAATACATGCCGGTCTTGAGTCCCTTCTTCCAGCCATAAAAGTGCATACTT 856759 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 || ||||| | | | ||| | |||| || || | |||||| |||||||| Sbjct 856758 GTCAATTTGCCAAAGTTGGGTACGCCAATAAAGATGTTCAAGCTTTGACTTTGATCAATG 856699 Query 47133 AATGCACCTCTATCAGCTGCCATATCTA--AAATAACCCTTTGTGGTATCTCCCATACTG 47190 || |||||||| || || |||||||| | ||| || || ||| ||| ||||| || | Sbjct 856698 AACGCACCTCTGTCTGCCGCCATATCAATCAAAGTACGCT--GTGATATTTCCCAGACAG 856641 Query 47191 TTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgt 47247 |||| || ||| || | || | |||| ||| | ||||||| | ||| || | || Sbjct 856640 TTTTGTACATTGCCTTGAGGTGAGCCGGGATATTTGGGATATTTTGCACAGAGCCACTGT 856581 Query 47248 tttctataattttgttttttaa---ttcatttgaccaaagttttcgttcagttaatgttt 47304 || || ||| || | |||||| ||||| | |||| | | Sbjct 856580 CAGACATGATACGGTTCTTGACATCTTCATT---CCAAATTCCGAGTTCCACAAGATCCT 856524 Query 47305 ttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATAT 47364 | ||||| ||||| |||||||||||||| || | || || | || |||| | | Sbjct 856523 TCAAAAGCCATGGATTGACAATTTGAAATTCACCGGCGAGCACACGGCGTGTATACAAGT 856464 Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424 | ||||| ||||| | |||| ||| || | ||||||| ||||| || || | Sbjct 856463 TGGACGTATAGGGTTCAAAGCATTCGTTAAAGCCCAGGATTTGAGACGTTGACGCAGTGG 856404 Query 47425 GCATGGATGCAACTAATAAGCTA-TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNN 47483 |||| | ||| || || ||| | |||| ||| || | || || | Sbjct 856403 GCATAGGTGCCAC-AAGAAGAGAGTTTCGTACGCCGTGTTGACTAATTTTAGCCTTCAAA 856345 Query 47484 NGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATT--C 47541 | ||||||||| | | | || ||| ||| | || ||||| | ||| | Sbjct 856344 GCATCCCAATCCCATAAAGACGTAGGCGTCACACCCCACATGTCGTATTGCA--ATTGAC 856287 Query 47542 CTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCAC 47601 | || || ||| ||| | ||||||| ||| ||||||| | || ||| ||||||| Sbjct 856286 CCTTGGATACAGGACTACCTTGGTATGTTTCATAGGGACCGTCCACTTGAGCAAGTTCAC 856227 Query 47602 AACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG 47661 | ||||||||| || || || ||||||||||| |||| | |||| || | | | Sbjct 856226 AGGATGCTTCCAACGCGGCATGGTAGATTGTTTCAAAGATTTGTTTGTTCAGCATTTTGG 856167 Query 47662 CTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACAC 47721 |||| |||||||| ||||| |||| ||| || | ||||| |||| Sbjct 856166 CTTCATCGGATTCAAAGGGATAACGCATAAGCATGAATGCATCAGCAAGGCCTTGTACAC 856107 Query 47722 CAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGT 47781 | | |||||| || | ||| || || || ||||| | || || | || Sbjct 856106 CTAGACCAATAGGGCGATGTCGCAAGTTCGATCTTTCGGCTTCAATCACAGGGTAGTAGT 856047 Query 47782 TTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNA-CAATTTCTCTTAATTTA 47840 | | ||| || || || || || || || | ||||| Sbjct 856046 TGACATCGATGATCTTGTTCAGGTTCTTGGCAATCACCTTGGTCACCTTGTGC-AATTTT 855988 Query 47841 TTAAAATCAAACTTGTTA---TTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTA 47897 || |||||| | | | | || | ||||| | || || ||| || ||||| Sbjct 855987 TTGAAATCATAGTATTCACGGTTCACCACAAAGGAAGGCAGGGCAATACTGGCAAGATTG 855928 Query 47898 CATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACAT 47957 || ||||| | || | ||| | | ||||| | ||||| | || || || | ||| Sbjct 855927 CAAACAGCGGCTTCGTCAGGACTGGAATATTCCACAATTTCGGTGCAAAGGTTGCTGCAT 855868 Query 47958 TTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015 ||||| || |||| ||||| || || ||| |||||||||||||||||| | || Sbjct 855867 TTGATGGTTCCCAGGTTTTGCTGGTTGGATTTGCG--GTTACATGCGTCCTTGTATAACA 855810 Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCT 48075 | || || | || ||||| | |||| ||| | ||||| | ||| | | ||| | Sbjct 855809 TGAATGGATTGCCGGTTTCCGTTTGAGCTTCCAAGATAGCATACCATAACTTTTGAGCTT 855750 Query 48076 TTATAACAGCTCTAGCTTTATTATCATGTTCGTA--TTTAGTATATAACTTCTCAAATTC 48133 | || | | ||| | || |||| || ||| || | | |||| ||||| Sbjct 855749 TGATGGTTTCACGAGCACGACCTTCGCGTTCATACTTTTCATAGAGAGCTTCG--AATTC 855692 Query 48134 ATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTC 48193 ||| || | || | || ||| ||||| ||| | || || | || ||||| || | Sbjct 855691 ATCACCCCAGACCTCATGTAAACCAGGCGCCTCACTTGGGCAAAACATGGACCATTCGCC 855632 Query 48194 ATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCT 48253 | || || | ||||||| | ||| || ||||| ||||| ||| | ||| | Sbjct 855631 GTTGGCTTCAACACGTTTCATAAAGAGATCGGGAATCCACAGAGCATAAAAGAGATCACG 855572 Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313 || | | ||| || |||||| |||| | || || | |||| | || |||| Sbjct 855571 AGCACGGATTTCGTCCTTGCCAACATTCTTGCGGAGATCCAAAAAGGTAAAGATGTCAGG 855512 Query 48314 ATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTAT 48373 |||||| ||||| | ||| || || | |||| || ||||| ||||| ||||| || | Sbjct 855511 ATGCCAAGGTTCAAGATACATGGCAAAGGCACCAGGACGTTTGTTACCACCTTGGTCGAC 855452 Query 48374 ATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATA-CCAT 48432 ||| | ||| || ||||| |||| | | ||| || | ||||||||| || ||| |||| Sbjct 855451 ATAACGGGCTGTGTTGTTGAAAACACGCAGCATAGGAAGAATACCATTGGA-ATAGCCAT 855393 Query 48433 TGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCAC 48492 | || || | ||| ||| || |||| | ||||| || | ||| || |||| Sbjct 855392 TTGTACCAGCAATGTAAGAACCCGTAGCACGAATATTGTGGATGTTGAGACCAATGCCAC 855333 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 |||| | || || ||| | |||||| ||| || || ||||| || || || ||| | Sbjct 855332 CTGCTGTCTTGGAGATTTGGGCACACACTTTGAGAGTTTCATAGATGCCCTCGATAGAGT 855273 Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612 | ||| |||| | | | ||||| |||||||| ||| || || || | ||| | Sbjct 855272 CTTCTTTCATGGTGAGCAAGAAACAGGAGGACATTTGGGGACGAGGTGTACCGGCATTGA 855213 Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672 |||| || || |||||| |||| |||| || || | | || || |||||||| Sbjct 855212 ATAAAGTAGGGCTTGCATGTGTAAAGAATTTTTCGGACATAAGGTTGTAAGTTTCAATGG 855153 Query 48673 CAGAATCTATATC---CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAG 48729 |||| || ||||| || ||| ||||| || | |||||||| | || || ||||| Sbjct 855152 CAGAGTCGATATCTTCCCCGTGA---ATACCAATGGCCACACGCATAATCAAATGTTGAG 855096 Query 48730 GTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAAC 48789 | | ||| | | ||| ||| |||||||||||||| || |||||| || || || | Sbjct 855095 GACGTTCTGCTACCTTGCCATTGATTTTCAAAAGATAGGAGCGTTCCAAGGTCTTGAATC 855036 Query 48790 CAAAATAGTTGTA 48802 ||||| ||||||| Sbjct 855035 CAAAAAAGTTGTA 855023 Score = 127 bits (140), Expect = 2e-24 Identities = 302/454 (67%), Gaps = 2/454 (0%) Strand=Plus/Plus Query 48099 TCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCA 48158 ||| | || ||||| ||||| | | ||||||||||| ||||| || | ||| || ||| Sbjct 996326 TCACGCTCATATTTGGTATACAGTTGTTCAAATTCATCTCCATAGACTTGATCCAATCCA 996385 Query 48159 GGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAAT 48218 ||| | ||| || | ||| ||||| | |||| || || | ||||||| Sbjct 996386 TAGGCTTCGTGAGGGCAAAACAAAGACCATTGTTCATTCGCTTCCACACGTTTCATAAAG 996445 Query 48219 ATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278 | ||| | |||||| | | ||| | || | || | ||||||||| |||||| Sbjct 996446 AGATCGCACACCCAAAGTCCAAGAAAGAGGTCACGAGCACGTAGTTCTTCCTTGCCAGAG 996505 Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338 ||| | || || | |||||| || | |||||||||||| ||||| ||||| || || Sbjct 996506 TTCTTGCGGAGGTCCAAAAAGTCAATAACATCAGCATGCCAAGGTTCCAAATACATAGCA 996565 Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398 | ||| ||||| || ||||| | | | | |||||||| || || ||| Sbjct 996566 AAGCTACCATTGCGTTTGCCGCCACCTTGTGTCACAAAACGGGCAGTATCATTGTAGACT 996625 Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTA 48458 | | ||| || | ||| ||||| || |||||||||| || | |||||| ||| Sbjct 996626 CGAAGCATGGGTATAATGCCATTGGACGTACCATTGGTGCCTGCAATATATGACCCAGAG 996685 Query 48459 GCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC 48518 |||| || || || || || | ||||||||| ||| || ||| | ||||| Sbjct 996686 GCTCGGATTTTTTGAAAGCCAACTCCAACACCACCTGCTGATTTGGAAATTTGTGCACA- 996744 Query 48519 CGTTTA-AGGGTATCATAAATTCCTTCTATACTA 48551 || | || ||||||||||| ||||| |||||| Sbjct 996745 GGTCGACAGAGTATCATAAATGCCTTCAATACTA 996778 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 47016 CGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTT 47075 |||||||||||||| ||||| ||||| || |||| |||| |||||||| || Sbjct 994991 CGTAAATAATACATTCCAGTTTTTAATCCCTTCTTCCAGGCATAAAAATGCATCGAGGTC 995050 Query 47076 AATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAAT 47135 || || |||| ||||||| | | || ||| | |||||| |||||||||||| Sbjct 995051 AACTTGCCATAAGTAGGTTCGCCAGTGAAAAGATTCATCGATTGAGATTGATCAATAAAT 995110 Query 47136 GCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTA 47195 || || | ||||| |||||||| | || |||| ||| | || |||||||||||||| Sbjct 995111 GCCCCACGGTCAGCAGCCATATCAATGATCACCCGTTGCGAGATTTCCCATACTGTTTTG 995170 Query 47196 TA 47197 || Sbjct 995171 TA 995172 >seq1 Length=3895514 Score = 129 bits (142), Expect = 7e-25 Identities = 342/516 (66%), Gaps = 15/516 (3%) Strand=Plus/Minus Query 18672 TTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-T 18730 |||||| |||| || | |||||||||||| || ||||| || | | || || ||| | Sbjct 3275036 TTGATAATCGGAGACACGTTTTTCAAAGAAGTTGGTTTTGCCTTGAAGGGAGAT-CATAT 3274978 Query 18731 CCATAAAATCAAATGGATTTTTTACATTATATA--tttttttGAATCCTAATTCTAATAG 18788 |||| || ||||| ||||| | || || || | |||| || | | | | Sbjct 3274977 CCATGAAGTCAAAGGGATTAGTGGAGTTGTAATGCTTATCTTGA--CCAAGAGCAACCAA 3274920 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 || | ||| || ||||||| ||| ||| | ||| | | | ||||| || || | Sbjct 3274919 GAGACGATCGGCGACAAATTCAATGTATTGGCACATAAGCTTGGAGTTCATACCAATAAG 3274860 Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 |||||| || ||||| || | |||||||||||| || || || || || || Sbjct 3274859 AGCAACAGGGAGAGCATCCGTCAAAAATTCTTGTTCAATGGCAACAGCTTCCACAATGAT 3274800 Query 18909 AGATACA---ACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGC 18965 | || || | ||| |||| | | ||| ||| ||||| ||||| || Sbjct 3274799 ---TTCACGCACACGATCACTGCTAGGTTGATGATGAATATGACCAAACAATAAACAAGC 3274743 Query 18966 AAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGG 19025 ||| ||| || || || ||||| | || ||||||||||| || || || |||||||| Sbjct 3274742 AAAGTCAGTGTGAAGACCTTCGTCACGACAGATCAATTCATTGGAGAAGGTCAAACCAGG 3274683 Query 19026 CATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACC 19085 ||||| || | ||| || | |||||| || || ||||| | ||||| ||||| ||||| Sbjct 3274682 CATCAAACCACGTTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACC 3274623 Query 19086 TTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCA 19145 ||| || || ||||| || || || | ||| || | | ||||| | ||||| Sbjct 3274622 TTCCACAGCAGCAAAGGCCACAAGACGTTCAGCAAA---TGATTCATTGCCACTGATCCA 3274566 Query 19146 TTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGG 19181 | | |||||||||||||| || || | ||| || Sbjct 3274565 TCGGAAAGCCCAATCAGCCTTTTTCTTAATACAAGG 3274530 Score = 114 bits (126), Expect = 1e-20 Identities = 191/266 (72%), Gaps = 10/266 (4%) Strand=Plus/Minus Query 19240 TCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAA 19299 || ||||||||||| || |||| | |||||||||||| || || || ||||| ||| Sbjct 3274337 TCAATCAATAAACTATAAGTTTCAGCATGAATATTTTCAATCATGATTTGGAATCCATAA 3274278 Query 19300 AAACATCTTGCTTCTGTTATCTGTACTTCACTACA-AAATCTTTCGACCAAATTTTCATT 19358 || ||| | ||||| | |||| |||||| | || ||| ||| ||||| ||||| || Sbjct 3274277 AAGCATTTGGCTTCAGCGATCTTGACTTCA-TCCATAAAGTTTTGCACCAAGTTTTCGTT 3274219 Query 19359 AACTATTCCATCACTAGCT-GCAAAAAATGCTAATACATG---TTTAATAAAATGTTTTT 19414 || || ||||| | |||| ||||| || || || ||||| ||| ||| ||| | Sbjct 3274218 GACAATACCATC-CGAGCTAGCAAAGAAAGCCAACACATGAGAGATAAAGAAACGTTCGT 3274160 Query 19415 CATCTGAGGTTAATGTATT-CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473 | | || | ||| || ||| |||||| |||| || || | || | ||||||| | Sbjct 3274159 CGT-TGTTCATTTTGTTTTCCCAGTCATTAGTATCCTTGGAGAGGTCAATTTCTTCAGCA 3274101 Query 19474 GTCCAAAAAGAAGCCTC-TGCTTTTT 19498 ||||| |||||||| || |||||||| Sbjct 3274100 GTCCAGAAAGAAGCTTCGTGCTTTTT 3274075 >seq17 Length=590484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 46977 TCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTC 47036 || ||||||||||| || | || || | | ||| ||| || || ||||| |||||| Sbjct 156547 TCAACAGTAAACTTGATGGCATCCACGGCAGGTCTTGATCGCAAGTAGTACATCCCAGTC 156606 Query 47037 TTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCT 47096 || || ||| ||||| ||||||||||||| || || || ||| ||||||| Sbjct 156607 TTCAACCCTTTTTTCCATGCATAGAAATGCATTGATGTCAACTTGCCATACGTAGGTTCA 156666 Query 47097 GAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATA 47156 | || | ||| | || ||| ||||| ||||||||||| | || || ||||| Sbjct 156667 CCAGTAAACAAATTCATGGACTGAGATTGATCGATAAATGCACCACGGTCTGCAGCCATG 156726 Query 47157 TCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATA 47197 || | || || | ||| | ||| ||||| || || || || Sbjct 156727 TCAATGATCACTCGTTGAGATATTTCCCACACCGTCTTGTA 156767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108139522160