Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=3895514 Score = 123 bits (136), Expect = 3e-23 Identities = 125/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 37166 AAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGA 37225 |||||||||||| ||||| ||| || | |||||| || | || ||||||||||| || Sbjct 3274757 AAACAATAAACAAGCAAAGTCAGTGTGAAGACCTTCGTCACGACAGATCAATTCATTGGA 3274698 Query 37226 AAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCC 37285 ||||| || || ||||| ||||| | ||| || | ||| || || | ||||| | || Sbjct 3274697 GAAGGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAGAAGATGGAGGCAAAGGCACC 3274638 Query 37286 AGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 ||| ||||| |||||||| || || ||||| || ||||||||| Sbjct 3274637 AGAGAAGAAGATACCTTCCACAGCAGCAAAGGCCACAAGACGT 3274595 Score = 104 bits (114), Expect = 3e-17 Identities = 196/283 (69%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 37422 AAGtttttttCTTCACTA---TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 ||||||| || |||| | || | |||||||| ||||| | ||||||||| ||||| Sbjct 3274373 AAGTTTTCTTTTTCAACAGGGTCCTTGATATAAGTGTCAATCAATAAACTATAAGTTTCA 3274314 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 | |||||||||||||| || || || |||||||| || | ||||||| | | Sbjct 3274313 GCATGAATATTTTCAATCATGATTTGGAATCCATAAAAGCATTTGGCTTCAGCGATCTTG 3274254 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT-GCAAA 37597 || || | | ||| | | | |||||||| || || || ||||| | |||| ||||| Sbjct 3274253 ACTTCATCCATAAAGTTTTGCACCAAGTTTTCGTTGACAATACCATC-CGAGCTAGCAAA 3274195 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAATC 37654 |||||| | |||| ||||| | ||| || | || || | |||| ||| || Sbjct 3274194 GAAAGCCAACACATGAGAGATAAAGAAACGTTCGTCGTTGTTCATTTTGTTTTCCCAGTC 3274135 Query 37655 ATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 |||| |||| || || | |||| ||| ||| | ||||| ||| Sbjct 3274134 ATTAGTATCCTTGGAGAGGTCAATTTCTTCAGCAGTCCAGAAA 3274092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316104027760