Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq67 188 6e-43 seq34 158 1e-33 seq8 125 6e-24 seq22 122 7e-23 seq5 122 7e-23 seq56 116 3e-21 seq15 116 3e-21 >seq67 Length=1953875 Score = 188 bits (208), Expect = 6e-43 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 1415684 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 1415743 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| |||||||| || |||||||| ||||| ||||| ||||||||| Sbjct 1415744 AATTGCTTACCAGCAAAAATCAAACGTTGCTGATCGGGGGGAATACCTTCCTTATCTTGA 1415803 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || ||| | || | || |||||| | ||||||||| ||||| | || ||| Sbjct 1415804 ATCTTTTGCTTCACATTGTCGATAGAGTCAGATGATTCCACTTCCAGAGTAATAGTCTTG 1415863 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| || ||||| Sbjct 1415864 CCAGTCAAAGTCTTGACAAAGATTTGCAT 1415892 Score = 188 bits (208), Expect = 6e-43 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 1415912 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 1415971 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| |||||||| || |||||||| ||||| ||||| ||||||||| Sbjct 1415972 AATTGCTTACCAGCAAAAATCAAACGTTGCTGATCGGGGGGAATACCTTCCTTATCTTGA 1416031 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || ||| | || | || |||||| | ||||||||| ||||| | || ||| Sbjct 1416032 ATCTTTTGCTTCACATTGTCGATAGAGTCAGATGATTCCACTTCCAGAGTAATAGTCTTG 1416091 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| || ||||| Sbjct 1416092 CCAGTCAAAGTCTTGACAAAGATTTGCAT 1416120 Score = 170 bits (188), Expect = 2e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| || || ||||| ||||| || |||||||| | | ||| | | |||| ||| Sbjct 1415456 ACCAAATGGAGAGTCGATTCCTTTTGGATGTTGTAATCTGACAAAGTACGGCCATCTTCC 1415515 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| || || |||||||| || || || || ||||| ||||| || |||||| Sbjct 1415516 AATTGCTTACCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGA 1415575 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||||||| ||| | || | || |||||| | ||||||||| ||||| | || ||| Sbjct 1415576 ATCTTTTGTTTAACATTGTCGATAGAGTCAGATGATTCCACTTCCAGAGTAATAGTCTTG 1415635 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || ||||| || ||||| Sbjct 1415636 CCAGTCAAAGTCTTGACAAAGATTTGCAT 1415664 Score = 170 bits (188), Expect = 2e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||||||||| ||||| ||||| || ||||| || | | ||| | | |||| ||| Sbjct 1480909 ACCAAATGAAGGGTCGATTCCTTTTGAATGTTGTAGTCCGACAAAGTGCGGCCATCTTCC 1480968 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| ||||| || ||||| ||||| || || ||||| || |||||| Sbjct 1480969 AATTGCTTACCAGCAAAGATCAATCGTTGTTGGTCGGGAGGGATACCTTCCTTGTCTTGA 1481028 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||||||| ||| | || | | |||||| |||||||||| ||||| | || ||| Sbjct 1481029 ATCTTTTGTTTCACATTGTCAATTGAGTCAGAGCTTTCCACTTCCAGAGTAATAGTCTTG 1481088 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || ||||| || ||||| Sbjct 1481089 CCAGTCAGAGTCTTCACAAAGATTTGCAT 1481117 Score = 165 bits (182), Expect = 6e-36 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| |||||||| ||||| || |||||||| | | ||| | | |||| ||| Sbjct 1481137 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1481196 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| || | ||| ||||||||||| || || ||||| || |||||| Sbjct 1481197 AATTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATACCTTCCTTGTCTTGA 1481256 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||||||| ||| | || | | |||||| |||||||||| | || | || ||| Sbjct 1481257 ATCTTTTGTTTCACATTGTCAATTGAGTCAGAGCTTTCCACTTCCAATGTAATAGTCTTG 1481316 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || ||||| || ||||| Sbjct 1481317 CCAGTCAAGGTCTTCACAAAGATTTGCAT 1481345 Score = 145 bits (160), Expect = 6e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||| ||||| || ||||| || | | ||| | | |||| ||| Sbjct 1416140 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGGCCATCTTCC 1416199 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||| ||||| ||||| || | ||| ||||| || || ||||| ||||| |||||||| Sbjct 1416200 AATTGTTTACCAGCAAAGATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGG 1416259 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||||||||| ||| | || | | ||| || | ||||||||| | || | || ||| Sbjct 1416260 ATTTTTTGTTTGACATTGTCAATGGAGTCGGAGGATTCCACTTCCAAGGTAATGGTCTTG 1416319 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | ||| || || || || |||||| Sbjct 1416320 CCAGTAAGAGTCTTGACGAAAATTTGCATG 1416349 >seq34 Length=2241197 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| |||||||| ||||| || ||||| || | | |||||| |||| || Sbjct 1642866 ACCAAATGAAGTGTAGATTCCTTTTGAATGTTGTAGTCCGATAAAGTTCTTCCATCTTCT 1642807 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || || || |||| || |||||||| || ||||| ||||| || |||||| Sbjct 1642806 AATTGCTTTCCAGCGAAAATCAGTCGTTGTTGATCAGGGGGAATTCCTTCCTTGTCTTGA 1642747 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||||| || ||| | || | | ||||| | ||| ||||| ||||| | || ||| Sbjct 1642746 ATTTTTTGCTTGACATTATCGATTGAATCAGAAGATTCTACTTCCAGAGTAATGGTCTTG 1642687 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| | ||| || ||||| || |||||| Sbjct 1642686 CCGGTAAGAGTCTTAACAAAAATTTGCATG 1642657 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| || |||||| || || || | || ||||| ||||| ||||||||||| | Sbjct 1643112 CCACCTCGTAGACGTAATACCAAGTGTAATGTTGATTCCTTTTGAATATTGTAATCAGAT 1643053 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| ||||||||||| || ||||| |||| ||| || |||||||| || Sbjct 1643052 AAGGTACGCCCATCTTCCAATTGCTTCCCAGCAAAGATCAGACGTTGCTGATCGGGAGGG 1642993 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || |||||||| |||||||| || | || | || |||||| | ||||||| Sbjct 1642992 ATACCTTCCTTGTCTTGAATCTTTTGTTTGACGTTGTCGATAGAGTCAGAGGATTCCACT 1642933 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | |||||||| || | || || ||||| || ||||| Sbjct 1642932 TCCAAAGTAATAGTTTTGCCTGTAAGGGTCTTGACAAAGATTTGCAT 1642886 >seq8 Length=1007018 Score = 125 bits (138), Expect = 6e-24 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| ||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 757507 ACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCTTCC 757566 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| || || |||||||| || || || || ||||| ||||| |||||||| Sbjct 757567 AATTGCTTACCAGCGAAAATCAAACGTTGCTGGTCAGGAGGAATACCTTCCTTATCTTGG 757626 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||||| || || | || | || |||||| Sbjct 757627 ATTTTTTGCTTGACGTTGTCGATAGAGTCAGA 757658 >seq22 Length=518773 Score = 122 bits (134), Expect = 7e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| ||||| ||||| || ||||| || | | ||| | |||| ||| Sbjct 75903 ACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTGCGACCATCTTCC 75844 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| ||||| |||||||| || ||||| || ||||| ||||| || ||||| Sbjct 75843 AATTGCTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGG 75784 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||||| || ||| | || | || |||||| Sbjct 75783 ATTTTTTGCTTGACATTGTCGATAGAGTCAGA 75752 >seq5 Length=1173598 Score = 122 bits (134), Expect = 7e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| || ||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 909363 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCTTCC 909304 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| || || |||||||| || ||||| || ||||| ||||| || |||||| Sbjct 909303 AATTGCTTACCAGCGAAAATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 909244 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 || ||||| || ||| | || | | |||||| Sbjct 909243 ATCTTTTGCTTGACATTGTCGATCGAGTCAGA 909212 >seq56 Length=2073579 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| || ||||| ||||| || ||||| || | || ||| | | |||| ||| Sbjct 1295632 ACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCTTCC 1295573 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||||||||| || || ||||| || || || || || ||||| ||||| || ||||| Sbjct 1295572 AATTGCTTACCAGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGG 1295513 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||||| || ||| | || | || |||||| Sbjct 1295512 ATTTTTTGCTTGACATTGTCAATAGAGTCAGA 1295481 >seq15 Length=645780 Score = 116 bits (128), Expect = 3e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| || || ||||| ||||| || ||||| || | | || | | | Sbjct 322220 ACGGAGAACCAAATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGGCC 322279 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||||||||||||| || || |||||||| || ||||| || ||||| ||||| || Sbjct 322280 ATCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGCTGATCAGGAGGAATACCTTCCTT 322339 Query 101374 ATCTTGAATTTTTTGTTTTACA 101395 |||||| |||||||| || ||| Sbjct 322340 ATCTTGGATTTTTTGCTTCACA 322361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277946013558