Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq28 159 6e-34 seq2 122 2e-22 >seq28 Length=432467 Score = 159 bits (176), Expect = 6e-34 Identities = 1078/1713 (63%), Gaps = 75/1713 (4%) Strand=Plus/Minus Query 212585 GGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGC 212644 |||||| || |||||||| |||||||| || ||||| |||||| | | |||||| || Sbjct 235259 GGTGCGGAGGTAGTACATACCGGTCTTGAGCCCCTTCTTCCAGCCATAAAAGTGCAT-GC 235201 Query 212645 TGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGA 212704 | |||| || | | || || || | ||| |||| || | | || Sbjct 235200 T---AGTTAATTTACC--AAAGTTGGGGAC---------GCC--GATGAAGATGTTGAGA 235157 Query 212705 CT--GACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT-CTCTG 212761 || |||| ||||| ||||| | | | ||| |||||||| || || | || | | || Sbjct 235156 CTTTGACTTTGGTCGATGAAAGCACCACGGTCGGCGGCCATATCAATCA-ATGTACGTTG 235098 Query 212762 GGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTT 212821 |||| ||||| ||||||||| | || ||||||| | | |||| | || || Sbjct 235097 CGAGATTTCCCAGACGGTCTTGTACATGGCTTTGAGATGTGCAGGGATCGACGCAATATT 235038 Query 212822 CTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCC 212878 ||| || || || || | ||| | | | | | || || || ||||| | || Sbjct 235037 CTGTACCGAGCCACTATCAGACATGATGCGGTTCTTG---ATATCTTCATTCCACACACC 234981 Query 212879 CCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCAC 212938 | | | || ||| | ||| |||||||| || ||||| ||||| | ||||| Sbjct 234980 CAGTTCCACAAGATCCTTCAGCAGCCATGGGTTGACGATTTGGAATTCACCGGCAAGCAC 234921 Query 212939 CCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTG 212998 | | ||| | ||| || || || || |||| || |||||| |||||||| || Sbjct 234920 ACGACGTGTGTATAGGTTGGAGGTATAAGGTTCGAAGCATTCGTTGAAACCCAGAATTTG 234861 Query 212999 TGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCC 213058 | || || || ||||| || ||||||| | ||| | ||| ||||| | | Sbjct 234860 AGATGTCGATGCCGTAGGCATAGGTGCCACCAATAACGAGTTGCGCACACCGTGTTGACT 234801 Query 213059 GATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTT 213118 ||| | | |||||| |||||| | || | | || ||||| Sbjct 234800 GATCTTTTCCTTCAATGTTGCCCAATCCCAT-------AAAGATGATGGTG--TCACGCC 234750 Query 213119 CCACATGTCAAACTGCAAGATG-CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGG 213177 |||||| || | |||| | || || ||| || || || || ||||| | ||||| Sbjct 234749 CCACATATCGTATTGCA-GTTGACCCTTGGAGACAGGACTTCCTTGGTATGTTTCGTAGG 234691 Query 213178 GGCCATGCTCCTTG-GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCA 213236 ||| | | |||| ||||| ||||| || || | || || || | ||||||||||||| Sbjct 234690 TGCCTT-CAACTTGAGCCAGTTCGCAAGAAGCTTCCAATGCCGCATGGTAGATGGTTTCA 234632 Query 213237 AATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT----CATCATGCG 213292 || || | |||||| |||||||| || ||| ||||| || ||||| || Sbjct 234631 AAAATTTGTTGGTTGAGTTTCTTGGCTTCATCGGATTCAAAGGG-ATAGCGCATCA-GCA 234574 Query 213293 TTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA 213352 | || ||||||| || || || || || | || || || | |||| ||| || Sbjct 234573 TA--AATGCATCAGCAAGACCTTGCACACCAAGACCAATAGGGCGATGTCGTTTGTTGGA 234516 Query 213353 -CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGG 213411 | | ||| ||| ||| || || | ||| || ||||||||||| | || || Sbjct 234515 TCGTTCAGCT-TCCACCACAGGATAGTAATTGATATCAATGATCTTGTTCAAATTTTTGG 234457 Query 213412 TGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGC---CCCCGTCCT 213468 || ||| |||| ||| | | ||| | || |||| | ||| | | || | Sbjct 234456 TGATCACCTTGGCGACTTTGTGCAGTTTCT------TGAAATCATAGGATTCACGGTTCA 234403 Query 213469 GCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTG 213528 |||||| ||| | |||||| ||||| ||||| || || || || || | || | | Sbjct 234402 CGACAAACGAAGGTAAGGCGATACTGGCAAGGTTACACACAGCGACTTCATCAGGGCTAG 234343 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 ||| || | ||| || || || || || |||||| ||||||||||| ||| || || | Sbjct 234342 AGTATTCGACGATTTCTGTACAAAGATTACTGCATTTGATGGTGCCCAAGTTTTGTTGAT 234283 Query 213589 TTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648 |||| || |||| || ||||||||||||||| | ||| ||| || || || | Sbjct 234282 TTGATTTCCGGTTGCAAGCATCCTTGTAGAGCATAAAAGGGTTCCCAGTTTCCGTTTGAG 234223 Query 213649 ACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCG 213708 |||| || ||| | | | ||||| | | | || || | ||| Sbjct 234222 CTTCCAGGATAGCATACCACAATTTCTGCGCCTTCATG----GTTTCAC-GCGCACGGCC 234168 Query 213709 TAGCC--TCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCC 213766 | || ||||| | ||| ||||||| | ||||||| ||||| || | || || Sbjct 234167 TTCCCGTTCGTATTTTTCATAGAGCTGTTCAAATTCGTCTCCCCAAACATCTTGGAGCCC 234108 Query 213767 CGGACAGGATGCG---GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCAT 213823 || | | | ||||| | | | |||||| || | || || | | ||| Sbjct 234107 ---ACGCGCTTCACTTGGACAAAACAAGGACCAGTCGCCATTCGCTTCCACACGTTTCAT 234051 Query 213824 GAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCC 213883 || || || |||| ||| || || || || || | | | | || ||| || Sbjct 234050 AAAGAGATCAGGGATCCAGAGGGCATAAAAGAGATCACGAGCACGGATTTCATCCTTGCC 233991 Query 213884 AGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943 | || ||||| ||||| | ||| |||||||||||| ||||| || |||| || || Sbjct 233990 AACATTCTTGCGAAGATCCAAGAAGGTAAAGATGTCCGCATGCCAAGGTTCCAAATACAT 233931 Query 213944 GGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000 ||||| || || || | | ||||| || || ||||| | || ||||||| Sbjct 233930 AGCAAAAGCACCAGGGCGTTTGTTGCCACCTTGATCCACGTAACGAGCGGTATTGTTGAA 233871 Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060 || || || | || | | || ||||| | |||||||||||||| || || ||||| Sbjct 233870 GACACGAAGCATAGGAAGAATACCATTGGAGTAGCCGTTGGTTCCCGCGATGTAAGAGCC 233811 Query 214061 GGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGC 214120 | ||| | | |||| ||| ||| || |||||||| || |||||| || ||| Sbjct 233810 TGTGGCACGAATGTTGTGGATGTTGAGACCAATGCCACCTGCCGTCTTGGAAATTTGGGC 233751 Query 214121 GCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAA 214180 || | | ||| || ||| || | ||| ||| ||| | | | | |||||||| Sbjct 233750 ACACACTTTGAGAGTTTCGTAGATACCTTCGATGGAGTCTTCTTTCATGGTGAGCAAGAA 233691 Query 214181 GCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGAT 214240 ||| ||||| ||||| | | | ||| | |||||| | || || || |||||| | Sbjct 233690 ACAGGAGGAGAGTTGGGGTCGAGGAGTGCCTGCGTTGAATAAGGTAGGACTAGCATGGGT 233631 Query 214241 CATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273 | |||| | || | ||| ||||||| || Sbjct 233630 GAAGTACTTTTCGGACATGAGGTTGTAGGTTTC 233598 >seq2 Length=1684868 Score = 122 bits (134), Expect = 2e-22 Identities = 471/723 (65%), Gaps = 24/723 (3%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 || ||||| || || || ||||| | |||||| | | || ||||| || || ||| Sbjct 856512 GGATTGACAATTTGAAATTCACCGGCGAGCACACGGCGTGTATACAAGTTGGACGTATAG 856453 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || || | || ||||| ||||| || || | || || |||||||| || ||| Sbjct 856452 GGTTCAAAGCATTCGTTAAAGCCCAGGATTTGAGACGTTGACGCAGTGGGCATAGGTGCC 856393 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || || ||| ||| | || ||||| | | || || | | |||| |||| | Sbjct 856392 ACAAGAAGAGAGTTTCGTACGCCGTGTTGACTAATTTTAGCCTTCAAAGCAT--CCCAAT 856335 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 ||||| |||| || |||| ||| ||||||||| | ||||| || | Sbjct 856334 CCCATAA---AGAC--GTAGGCGTCA--CACC--CCACATGTCGTATTGCAATTGACCCT 856284 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || || || || || ||||| | ||||| || | | | | || || || |||| Sbjct 856283 TGGATACAGGACTACCTTGGTATGTTTCATAGGGACCGTCCACTTGAGCAAGTTCACAGG 856224 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | || || || | |||||| |||||||| || | |||| ||| | ||||| | Sbjct 856223 ATGCTTCCAACGCGGCATGGTAGATTGTTTCAAAGATTTGTTTGTTCAGCATTTTGGCTT 856164 Query 213265 CTGGGGACGTGAAGGGCATCAT-CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 | ||| ||||| || | ||| | ||| ||||||| || || || || || Sbjct 856163 CATCGGATTCAAAGGG-ATAACGCATAAGCATGAATGCATCAGCAAGGCCTTGTACACCT 856105 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTT 213382 | || || || | |||| || ||| || ||| || || || ||||| |||| Sbjct 856104 AGACCAATAGGGCGATGTCGCAAGTTCGATCTTTCGGCT-TCAATCACAGGGTAGTAGTT 856046 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442 | |||||||||||||| ||||| || ||| ||||| || | | || | | Sbjct 856045 GACATCGATGATCTTGTTCAGGTTCTTGGCAATCACCTTGGTCACCTTGTGCAATTTTTT 855986 Query 213443 GTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 | || | ||| | | || | |||||| ||||||||| || ||||| || || Sbjct 855985 GAAATCATA---GTATTCACGGTTCACCACAAAGGAAGGCAGGGCAATACTGGCAAGATT 855929 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTG-TACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||||| || | || | || | ||| || |||| || |||||||| |||||||||| Sbjct 855928 GCAAACAGCGGCTTCGTCAG-GACTGGAATATTCCACAATTTCGGTGCAAAGGTTGCTGC 855870 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGC 213620 || |||||| |||||||| || ||||| || |||||| | || | |||||||| | | Sbjct 855869 ATTTGATGGTTCCCAGGTTTTGCTGGTTGGA-TTTGCGGTTACATGCGTCCTTGTATAAC 855811 Query 213621 ATG 213623 ||| Sbjct 855810 ATG 855808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531705448960