Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq28 82.4 4e-11 >seq28 Length=432467 Score = 82.4 bits (90), Expect = 4e-11 Identities = 272/423 (64%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||| || ||||| | |||||||| | ||| | || | ||||| || || Sbjct 234053 CATAAAGAGATCAGGGATCCAGAGGGCATAAAAGAGATCACGAGCACGGATTTCATCCTT 233994 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || |||||| ||||| ||||| ||| || || | ||||| ||||| ||||| Sbjct 233993 GCCAACATTCTTGCGAAGATCCAAGAAGGTAAAGATGTCCGCATGCCAAGGTTCCAAATA 233934 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||||||||| ||| | ||| ||||||||||| ||||| | || || | || Sbjct 233933 CATAGCAAAAGCACCAGGGCGTTTGTTGCCACCTTGATCCACGTAACGAGCGGTATTGTT 233874 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||| || | ||| |||| | ||| | || | ||||| || | || | || Sbjct 233873 GAAGACACGAAGCATAGGAAGAATACCATTGGAGTAGCCGTTGGTTCCCGCGATGTAAGA 233814 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||||| | | ||| | ||| | | ||| || ||||| ||| || ||||| Sbjct 233813 GCCTGTGGCACGAATGTTGTGGATGTTGAGACCAATGCCACCTGCCGTCTTGGAAATTTG 233754 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| || | || ||| | || |||| ||| || ||||||| | || Sbjct 233753 GGCACACACTTTGAGAGTTTCGTAGATACCTTCGATGGAGTCTTCTTTCATGGTGAGCAA 233694 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| || || | ||| | ||| || |||| || ||||| || || ||||||| Sbjct 233693 GAAACAGGAGGAGAGTTGGGGTCGAGGAGTGCCTGCGTTGAATAAGGTAGGACTAGCATG 233634 Query 26353 AGT 26355 || Sbjct 233633 GGT 233631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039710111050