Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq45 89.7 6e-13 >seq45 Length=2104571 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 139856 CAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAA 139915 ||||||||| || || || ||||| ||||||| || ||||| || || || ||||||| Sbjct 1902386 CAGCATTGCTTCAGCAGCAGCAGTACCTTCATCCAAAAGAGAGGCATTGGCAATTGGTAG 1902445 Query 139916 TCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGA 139975 || || | || ||| | ||||||||||| || || | ||| || | || || | Sbjct 1902446 ACCAGTCAAATCACTGACCATGGTTTGGTAATTCAACAAGGATTCTAAACGACCTTGCGC 1902505 Query 139976 TATCTCAGCTTGATAGGGAGTGTA 139999 || |||| ||||||||||||||| Sbjct 1902506 AATTTCAGGTTGATAGGGAGTGTA 1902529 Score = 86.0 bits (94), Expect = 7e-12 Identities = 185/273 (68%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 |||||| || | ||||| | |||||||||| || | || ||||| || || ||||| Sbjct 1901682 ACCATGGTAAACAGCATACATAGCAGACATATTGGCCAAAAGGGCTTGAGCGGTACAGAT 1901741 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 |||||| || || || || | | ||||| || || | |||||| || || | | ||| Sbjct 1901742 GTTACTAGTGGCCTTTTCACGACGGATATGTTGTTCACGAGTTTGAAGAGCAAGACGGTA 1901801 Query 139391 TGCAGGATTGCC-TTCGC-TGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTC 139448 |||| || || | || | | | ||| ||||||||| | ||||| || | | Sbjct 1901802 AGCAGATTTACCATGAGCATCACGAGAGAC--ACCTACAATGCGACCAGGAATACGACGC 1901859 Query 139449 TTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATA 139508 |||| | || | || ||||| |||||||||||||| || | || | ||||| | Sbjct 1901860 TTATGTTCTTCCTTACAGGCGAAGAAGGCAGCATGAGGACCACCAAAACCGAGAGGAACA 1901919 Query 139509 CCAAACCTTTGCATACTACCTACAGCAATATCA 139541 || || | ||| | |||| | ||||||||| Sbjct 1901920 CCGAAACGTTGACTGTTACCCAAGGCAATATCA 1901952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997719676880