Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq67 102 7e-17 seq34 100 2e-16 >seq67 Length=1953875 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 |||||||| |||||||| || || || ||||| || ||||| | ||| ||| || || Sbjct 1481573 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481514 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || ||| | | || ||||| |||||| ||||| ||||| | || ||| Sbjct 1481513 GACTCTA---TCGACAATGTGAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGAT 1481457 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||| | | |||| ||| |||||||| | || |||| | | || | | || ||| Sbjct 1481456 CAGCAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGCCGCACTCTCTCTGACTAC 1481397 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||||||||| |||||||| | ||| ||||| Sbjct 1481396 AACATTCAAAAGGAATCTACTCTTCACTTGGTG 1481364 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||||| || ||||| || ||||| | ||| ||| | Sbjct 1415664 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACTATTACTCTGGAAGTGGAATCATCT 1415605 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || ||||| |||||| ||||| ||||| | || || || Sbjct 1415604 GACTCTATCGACAATGTTAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAG 1415545 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | |||| || ||||| || |||| |||| | | || || | ||||||||| Sbjct 1415544 CAACGTTTGATTTTCGCCGGTAAGCAATTGGAAGATGGCCGTACTTTGTCAGATTACAAC 1415485 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAAA 110503 || ||||| ||||| || | || ||||| | | || || || ||| || Sbjct 1415484 ATCCAAAAGGAATCGACTCTCCATTTGGTGCTTCGTCTTCGTGGTGGACAA 1415434 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || || |||||||| || ||||| ||| | || ||||| ||||||||| | ||| ||| Sbjct 1416354 TTCAACATGCAAATTTTCGTCAAGACTCTTACTGGCAAGACCATTACCTTGGAAGTGGAA 1416295 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 | ||| | | | | | || ||||| || || || || ||||| | || Sbjct 1416294 TCCTCCGACTCCATTGACAATGTCAAACAAAAAATCCAAGATAAGGAAGGTATTCCTCCA 1416235 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 || |||||| | || || | ||| |||||||| |||| |||| | | || | | || Sbjct 1416234 GACCAACAACGTCTCATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACTCTTTCTGAC 1416175 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||||||||||| |||||||| | ||| ||||| Sbjct 1416174 TACAACATTCAAAAGGAATCTACTCTTCACTTGGTG 1416139 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 |||||||| ||||| || ||| | || ||||| || ||||| | ||| ||| || || Sbjct 1481117 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACTATTACTCTGGAAGTGGAAAGCTCT 1481058 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| | || | | || ||||| |||||| ||||| ||||| | || || Sbjct 1481057 GACTCAATTGACA---ATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGAC 1481001 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| || | || | ||| ||||| || |||| |||| | | || || |||| ||| Sbjct 1481000 CAACAACGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTTTGTCGGACTAC 1480941 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||||||||| ||||| || | || ||||| Sbjct 1480940 AACATTCAAAAGGAATCGACCCTTCATTTGGTG 1480908 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 |||||||| ||||| || || || || ||||| || ||||| | ||| ||| || || Sbjct 1481345 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACATTGGAAGTGGAAAGCTCT 1481286 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| | || | | || ||||| |||||| ||||| ||||| | || ||| Sbjct 1481285 GACTCAATTGACA---ATGTGAAACAAAAGATTCAAGACAAGGAAGGTATCCCTCCCGAT 1481229 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| | || || | ||| ||||| || |||| |||| | | || | | |||||| Sbjct 1481228 CAACAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGCCGCACTCTTTCTGATTAC 1481169 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| ||||| |||||||| | || ||||| Sbjct 1481168 AACATCCAAAAGGAATCTACTCTTCATTTGGTG 1481136 >seq34 Length=2241197 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| ||||| || ||| | |||||||| |||||||| | ||| || || Sbjct 1642655 AACATGCAAATTTTTGTTAAGACTCTTACCGGCAAGACCATTACTCTGGAAGTAGAATCT 1642714 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| | ||| | || || || || ||| ||||| ||||| | ||| ||| Sbjct 1642715 TCTGATTCAATCGATAATGTCAAGCAAAAAATTCAAGACAAGGAAGGAATTCCCCCTGAT 1642774 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| |||| |||| || || || || | || |||| ||||| | |||| ||| Sbjct 1642775 CAACAACGACTGATTTTCGCTGGAAAGCAATTAGAAGATGGAAGAACTTTATCGGACTAC 1642834 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||||||||| |||||||| | || ||||| Sbjct 1642835 AACATTCAAAAGGAATCTACACTTCATTTGGTG 1642867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841127038342