Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq39 84.2 3e-11 seq18 84.2 3e-11 seq7 84.2 3e-11 >seq39 Length=337950 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||| | | |||||||||||||||||| |||| ||||| | |||||||||||||||| || Sbjct 163117 ATTCTTAGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 163176 Query 8716 TCCCCG 8721 |||||| Sbjct 163177 TCCCCG 163182 >seq18 Length=557977 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||| | | |||||||||||||||||| |||| ||||| | |||||||||||||||| || Sbjct 287819 ATTCTTAGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 287760 Query 8716 TCCCCG 8721 |||||| Sbjct 287759 TCCCCG 287754 >seq7 Length=1008621 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 ||| ||| | | |||||||||||||||||| |||| ||||| | |||||||||||||||| Sbjct 205426 CTTCTTCTTAGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 205367 Query 8713 GATTCCCCG 8721 |||||||| Sbjct 205366 AATTCCCCG 205358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652844032907360