Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 2e-13 seq2 86.0 8e-12 >seq23 Length=2342558 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 63746 TACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGA 63805 |||| |||| ||||| |||||||||||| | | ||||||||||||| |||| | | Sbjct 992031 TACCGCAAATGGGTGACAAATTTGCTTCTCGTCACGGTCAAAAAGGTACGATTGGTGTTA 992090 Query 63806 TTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCA 63865 |||||||||||||| | || || || || || ||| || ||||| |||||| Sbjct 992091 CATATCGACAAGAAGACTTCCCATTCACTTCTGAAGGCATCACGCCGGATCTTATCATCA 992150 Query 63866 ATCCACACGCTTTTCCCAGTCGTATGAC 63893 ||||||| || |||| ||||||||| Sbjct 992151 ATCCACATGCCATTCCTTCTCGTATGAC 992178 >seq2 Length=1684868 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 63752 AAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATTTATC 63811 |||| ||||| |||||||| ||| | | |||||| || || |||| | | |||| Sbjct 1025589 AAATGGGTGACAAATTTGCATCTCGTCACGGTCAAAAGGGGACAATTGGTGTTACATATC 1025530 Query 63812 GACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAATCCAC 63871 | |||||||| | || || || || || ||| ||| |||||| |||||||||||| Sbjct 1025529 GTCAAGAAGACTTCCCATTCACTTCCGAAGGCATCACACCGGATCTCATCATCAATCCAC 1025470 Query 63872 ACGCTTTTCCCAGTCGTATGAC 63893 ||||| |||| ||||||||| Sbjct 1025469 ACGCTATTCCATCTCGTATGAC 1025448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074416186640