Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Absidia_20repens_20[genbank_20GCA_5F002105175.1_202017-04-20] 94 sequences; 47,422,896 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq67 107 2e-18 >seq67 Length=1953875 Score = 107 bits (118), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||| || ||||| ||||| ||| Sbjct 1481575 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAG 1481634 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||| || ||||| || || || || |||||||| | ||| Sbjct 1481635 AGAGTGCGGCCATCTTCCAACTGTTTACCGGCAAAGATGAGACGTTGTTGGTCGGGAGGA 1481694 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | | |||||||| |||||||||||||| | | || | | |||| || |||| Sbjct 1481695 ATACCTTCCTTGTCTTGGATTTTTTGCTTCACATTATCG--ATGGAGTCGGAGGATTCCA 1481752 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | |||| || || || || || || || || || |||||||| |||||||| Sbjct 1481753 CTTCCAAGGTAATGGTCTTGCCAGTAAGGGTTTTAACGAAAATTTGCATGTT 1481804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303456792800