Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq748 89.7 4e-13 >seq748 Length=202608 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || ||| |||||| | ||||| ||||| || |||||| | ||| Sbjct 91292 GATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAA 91351 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | | |||||||| ||||| || ||||||||||||||| | || ||| Sbjct 91352 GATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91411 Query 29175 CG 29176 || Sbjct 91412 CG 91413 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || ||| |||||| | ||||| ||||| || |||||| | ||| Sbjct 91520 GATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAA 91579 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | | |||||||| ||||| || ||||||||||||||| | || ||| Sbjct 91580 GATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTTTTA 91639 Query 29175 CG 29176 || Sbjct 91640 CG 91641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || ||| |||||| | ||||| ||||| || |||||| | ||| Sbjct 91748 GATAAAGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAA 91807 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | | |||||||| ||||| || ||||||||||||||| | || ||| Sbjct 91808 GATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91867 Query 29175 CG 29176 || Sbjct 91868 CG 91869 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | || ||| |||||| | ||||| ||||| || |||||| | ||| Sbjct 91064 GATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAA 91123 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | | |||||||| ||||| || ||||||||||||||| | || ||| Sbjct 91124 GATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 91183 Query 29175 CG 29176 || Sbjct 91184 CG 91185 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | || ||| |||||| | ||||| ||||| || |||||| | ||| Sbjct 91976 GATAAGGAAGGTATTCCACCAGACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAA 92035 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | | |||||||| ||||| || ||||||||||||||| | || ||| Sbjct 92036 GATGGACGTACTCTTTCTGATTACAACATTCAAAAAGAATCTACTCTTCACTTAGTCTTA 92095 Query 29175 CG 29176 || Sbjct 92096 CG 92097 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || || || || || ||||| ||||| ||| ||| | | Sbjct 92111 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCTTCT 92170 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || |||| || ||| ||||| |||||| | || ||| ||| Sbjct 92171 GATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAA 92230 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | ||||| ||||| || |||||| | |||||| ||| | | |||||||| Sbjct 92231 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTCTTTCTGATTACAAC 92290 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||| || ||||||||||| ||| | || ||||| Sbjct 92291 ATTCAAAAAGAATCTACTCTCCACTTAGTCTTACG 92325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330596942925