Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anaeromyces_20robustus_20[genbank_20GCA_5F002104895.1_202017-04-20] 1,035 sequences; 71,685,009 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq304 82.4 5e-11 >seq304 Length=284809 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || ||||||||| ||| || || ||||||||||| || || ||| | || Sbjct 189516 AGGACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCT 189575 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || || ||||| || ||||| || || || || ||||| || | | ||||| || Sbjct 189576 TCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCT 189635 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | || | |||| ||||| || || | || ||||| Sbjct 189636 TGGATC-TTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGT 189694 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || ||||| |||||||| |||||| Sbjct 189695 CTTACCCGTAAGGGTTTTGACAAAGATTTGCATC 189728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067924749600